RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 BARD1Q99728 777 aaKnown RBP16.44■□□□□ 0.22
SSBP3-203ENST00000371319 GABARAPL1Q9H0R8 117 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 RUBCNLQ9H714 662 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 THSD1Q9NS62 852 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 NDUFAF4Q9P032 175 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 HCN3Q9P1Z3 774 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 PTGFRNQ9P2B2 879 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 BAG5Q9UL15 447 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 PI4KAP42356 2102 aa16.44■□□□□ 0.22
SSBP3-203ENST00000371319 ARID1BQ8NFD5 2236 aaPredicted RBP16.44■□□□□ 0.22
SSBP3-203ENST00000371319 ASNA1O43681 348 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 E2F6O75461 281 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 PDE9AO76083 593 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 ATP1B1P05026 303 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CHRM4P08173 479 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 NR2F1P10589 423 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 RNH1P13489 461 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SEPHS1P49903 392 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 EMP3P54852 163 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 ADARB1P78563 741 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 HSD11B2P80365 405 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 NR0B2Q15466 257 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CYP27C1Q4G0S4 372 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 NIPAL1Q6NVV3 410 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 WDR74Q6RFH5 385 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 OLIG3Q7RTU3 272 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 D2HGDHQ8N465 521 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SIMC1Q8NDZ2 872 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 GPR32P1Q8NGA4 272 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 OR6C4Q8NGE1 309 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 BBS10Q8TAM1 723 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 GEMIN6Q8WXD5 167 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 MS4A4EQ96PG1 132 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 TREX2Q9BQ50 279 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 ACTRT3Q9BYD9 372 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CAPN10Q9HC96 672 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 BCL2L10Q9HD36 194 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 EQTNQ9NQ60 294 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 IFT80Q9P2H3 777 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CLCA2Q9UQC9 943 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 GPC6Q9Y625 555 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 U3KQV3 271 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SDK1Q7Z5N4 2213 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 TMEM247A6NEH6 219 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 YKT6O15498 198 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 NME6O75414 186 aaPredicted RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CFIP05156 583 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 PNLIPP16233 465 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 FPR1P21462 350 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 PRKACGP22612 351 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 DNAJA1P31689 397 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 CAPGP40121 348 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 OR1E2P47887 323 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SKP1P63208 163 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 MAT1AQ00266 395 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 MYBPC1Q00872 1141 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 MGAT2Q10469 447 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 DUSP7Q16829 419 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 EXOSC6Q5RKV6 272 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SNAP47Q5SQN1 464 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 MFSD12Q6NUT3 480 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 TMEM154Q6P9G4 183 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 SLC41A2Q96JW4 573 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 RBM4BQ9BQ04 359 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 RBM4Q9BWF3 364 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 GAREM1Q9H706 876 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 DDX18Q9NVP1 670 aaKnown RBP16.43■□□□□ 0.22
SSBP3-203ENST00000371319 IRAK4Q9NWZ3 460 aa16.43■□□□□ 0.22
SSBP3-203ENST00000371319 PATE3B3GLJ2 98 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 TMEM150CB9EJG8 249 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 SIGLEC6O43699 453 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 IFI6P09912 130 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 THRBP10828 461 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 MYF6P23409 242 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 PPP2R1BP30154 601 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 GRM7Q14831 915 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 SYT16Q17RD7 645 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 PRICKLE4Q2TBC4 344 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 TRMT12Q53H54 448 aaKnown RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 PERM1Q5SV97 790 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 GUSBP11Q6P575 273 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 DHRSXQ8N5I4 330 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 ZNF675Q8TD23 568 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 DOK4Q8TEW6 326 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 CYGBQ8WWM9 190 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 NRBF2Q96F24 287 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 SLC35A4Q96G79 324 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 PEX11GQ96HA9 241 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 ZNF300Q96RE9 604 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 ZNF607Q96SK3 696 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 MBOAT4Q96T53 435 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 EPYCQ99645 322 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 NUDT22Q9BRQ3 303 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 RBCK1Q9BYM8 510 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 SOX17Q9H6I2 414 aaPredicted RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 CLK4Q9HAZ1 481 aaKnown RBP16.42■□□□□ 0.22
SSBP3-203ENST00000371319 MAT2BQ9NZL9 334 aa16.42■□□□□ 0.22
SSBP3-203ENST00000371319 TMEFF2Q9UIK5 374 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms