RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TMEFF2Q9UIK5 374 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 RPS6KA6Q9UK32 745 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TPRKBQ9Y3C4 175 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 SEC16AO15027 2179 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 PRAMEF26H0Y7S4 382 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 OPN1SWP03999 348 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 EPHA2P29317 976 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 TIA1P31483 386 aaKnown RBP eCLIP10.09□□□□□ -0.799e-11■■■■■ 30.9
TPM3-212ENST00000368533 BCL6P41182 706 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CRATP43155 626 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 DAPP51397 102 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 SOWAHCQ53LP3 525 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 CPTPQ5TA50 214 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 LAIR2Q6ISS4 152 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CALHM3Q86XJ0 350 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 CCDC28AQ8IWP9 274 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 FBXO15Q8NCQ5 510 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 PJA1Q8NG27 643 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 OR52J3Q8NH60 311 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 APOL4Q9BPW4 351 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 AIF1LQ9BQI0 150 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 SLIRPQ9GZT3 109 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 TPT1P8Q9HAU6 139 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZBTB20Q9HC78 741 aaPredicted RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 ASIC5Q9NY37 505 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
TPM3-212ENST00000368533 SNX8Q9Y5X2 465 aa10.09□□□□□ -0.79
TPM3-212ENST00000368533 ZNF860A6NHJ4 632 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 C4orf51C9J302 202 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 ZW10O43264 779 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 VIPP01282 170 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 SNRPD2P62316 118 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 SRSF11Q05519 484 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 CDC20Q12834 499 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 CSTF3Q12996 717 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 SYT16Q17RD7 645 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 AGAP6Q5VW22 663 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 SHQ1Q6PI26 577 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 LCTLQ6UWM7 567 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 AHSA2Q719I0 299 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 KRT78Q8N1N4 520 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 KCT2Q8NC54 265 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 MAFAQ8NHW3 353 aaPredicted RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 DYNC2LI1Q8TCX1 351 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 SLC37A2Q8TED4 501 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 FAR1Q8WVX9 515 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 TESCQ96BS2 214 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 AGAP4Q96P64 663 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 DUSP26Q9BV47 211 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 RNF167Q9H6Y7 350 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 EXO1Q9UQ84 846 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 MAN2B2Q9Y2E5 1009 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 PI4KAP42356 2102 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 A0A1W2PS29 197 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 UGDHO60701 494 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 KCNK5O95279 499 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 F3P13726 295 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 TNFRSF1BP20333 461 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 PKLRP30613 574 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 SOAT1P35610 550 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 KIAA1024LP59773 190 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 PRDX1Q06830 199 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 MADCAM1Q13477 382 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 DEFB133Q30KQ1 61 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 ZNF750Q32MQ0 723 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 FAM205BPQ63HN1 556 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 RAB42Q8N4Z0 105 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 OR2L3Q8NG85 312 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 OR8K5Q8NH50 307 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 CHTF18Q8WVB6 975 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 EXOSC8Q96B26 276 aaKnown RBP10.08□□□□□ -0.8
TPM3-212ENST00000368533 SP140LQ9H930 580 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 TM9SF3Q9HD45 589 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 IL1RAPQ9NPH3 570 aa10.08□□□□□ -0.8
TPM3-212ENST00000368533 ERI3O43414 337 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 CYP7B1O75881 506 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 TNFP01375 233 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 CHRM5P08912 532 aaPredicted RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 CCDC159P0C7I6 412 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 C8orf89P0DMQ9 161 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 PTPN6P29350 595 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 DNAJA1P31689 397 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 OR3A3P47888 321 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 SERPINB10P48595 397 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 GZMMP51124 257 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 RPS26P62854 115 aaKnown RBP10.07□□□□□ -0.8
TPM3-212ENST00000368533 OLR1P78380 273 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 CYP27C1Q4G0S4 372 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 B3GNT8Q7Z7M8 397 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 P2RY8Q86VZ1 359 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 P3H2Q8IVL5 708 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 NAGSQ8N159 534 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 LMX1AQ8TE12 382 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 PIK3R3Q92569 461 aa10.07□□□□□ -0.8
TPM3-212ENST00000368533 AICDAQ9GZX7 198 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms