RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CREB5Q02930 508 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 AWAT2Q6E213 333 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 VTCN1Q7Z7D3 282 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 CMTM8Q8IZV2 173 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MFSD8Q8NHS3 518 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 MYOFQ9NZM1 2061 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ANKRD33BA6NCL7 494 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 PLGLAQ15195 96 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 NSUN3Q9H649 340 aaKnown RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 WNT6Q9Y6F9 365 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ZNF704Q6ZNC4 412 aaPredicted RBP9.27□□□□□ -0.93
CUX1-203ENST00000360264 MS4A15Q8N5U1 240 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 S100PBPQ96BU1 408 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ACAD8Q9UKU7 415 aa9.27□□□□□ -0.93
CUX1-203ENST00000360264 ARFGEF2Q9Y6D5 1785 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ADRB3P13945 408 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 HYAL2Q12891 473 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 UGT3A2Q3SY77 523 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 EMID1Q96A84 441 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 WDR92Q96MX6 357 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 AMDHD1Q96NU7 426 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SRA1Q9HD15 236 aaKnown RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 NID2Q14112 1375 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 hCG_1807616A0A1W2PRN6 198 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 HPRP00739 348 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CHRM5P08912 532 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 HAPLN1P10915 354 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 CHRM1P11229 460 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 ZNF81P51508 661 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 GJA9P57773 515 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SLC22A16Q86VW1 577 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 Q8N402 240 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 TBC1D20Q96BZ9 403 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 C2orf42Q9NWW7 574 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SRRDQ9UH36 339 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 POLR2CP19387 275 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 PROZP22891 400 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 PYCR1P32322 319 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 RING1Q06587 406 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CARD17Q5XLA6 110 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 GSG1LQ6UXU4 331 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SHFQ7M4L6 423 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 IRF2BP1Q8IU81 584 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 PAPD5Q8NDF8 572 aaKnown RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 OR6N2Q8NGY6 317 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 EIF3FO00303 357 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 POLR1CO15160 346 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 ADAMTS4O75173 837 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ZNF675Q8TD23 568 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CHFRQ96EP1 664 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 RNF11Q9Y3C5 154 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ENTPD2Q9Y5L3 495 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 C1orf226A1L170 272 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ZNF850A8MQ14 1090 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ACSBG2Q5FVE4 666 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 KANK2Q63ZY3 851 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 NPY6RQ99463 290 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 OR51B5Q9H339 312 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ACOT13Q9NPJ3 140 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 FBXL3Q9UKT7 428 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 ARMCX6Q7L4S7 300 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 RPLP0P6Q8NHW5 317 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 DGKQP52824 942 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 DLX2Q07687 328 aaPredicted RBP9.26□□□□□ -0.93
CUX1-203ENST00000360264 GOLM1Q8NBJ4 401 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SNAPC3Q92966 411 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SGTBQ96EQ0 304 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ST14Q9Y5Y6 855 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 LDB2O43679 373 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CATSPEREQ5SY80 951 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CES4AQ5XG92 561 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SNX29P2Q8IUI4 249 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ZDHHC1Q8WTX9 485 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 OR6C70A6NIJ9 312 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 CRABP1P29762 137 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 TGFBR3Q03167 851 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 RDH10Q8IZV5 341 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 TCEAL4Q96EI5 215 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 PPM1HQ9ULR3 514 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 TOR1BO14657 336 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 C6P13671 934 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 DRD2P14416 443 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 GPX6P59796 221 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 PIGWQ7Z7B1 504 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 DUSP23Q9BVJ7 150 aa9.26□□□□□ -0.93
CUX1-203ENST00000360264 ITM2AO43736 263 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 UQCRC1P31930 480 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 THBS3P49746 956 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 KDELC1Q6UW63 502 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 TRMT10AQ8TBZ6 339 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 MCHR1Q99705 422 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 APOBEC3GQ9HC16 384 aaKnown RBP9.25□□□□□ -0.93
CUX1-203ENST00000360264 SRPK3Q9UPE1 567 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 OR51F1A6NGY5 319 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 S1PR4O95977 384 aa9.25□□□□□ -0.93
CUX1-203ENST00000360264 NRLP54845 237 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms