RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ZNF354AO60765 605 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 KITP10721 976 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 MPIP34949 423 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 SOX18P35713 384 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ASMTP46597 345 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 HLCSP50747 726 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 MRPS35P82673 323 aaKnown RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 OCRLQ01968 901 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 EXOSC7Q15024 291 aaKnown RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 IGFBP7Q16270 282 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 TRMT12Q53H54 448 aaKnown RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF766Q5HY98 468 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 IL23RQ5VWK5 629 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ANKRD26P1Q6NSI1 321 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 HORMAD2Q8N7B1 307 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 SIMC1Q8NDZ2 872 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 OR7G1Q8NGA0 311 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ASB15Q8WXK1 588 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 GAL3ST4Q96RP7 486 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 HES7Q9BYE0 225 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 WWTR1Q9GZV5 400 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ACBD3Q9H3P7 528 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 REEP4Q9H6H4 257 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 AKTIPQ9H8T0 292 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 TRIM45Q9H8W5 580 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 KLHL1Q9NR64 748 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ASF1BQ9NVP2 202 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 MARCOQ9UEW3 520 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF639Q9UID6 485 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 NTNG1Q9Y2I2 539 aa14.13□□□□□ -0.15
UBE3B-201ENST00000340074 ZGRF1Q86YA3 2104 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 NINQ8N4C6 2090 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 C2orf92A0A1B0GVN3 265 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 CD46P15529 392 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 SOX3P41225 446 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 PTGR1Q14914 329 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 EBPQ15125 230 aaKnown RBP14.12□□□□□ -0.15
UBE3B-201ENST00000340074 MPEG1Q2M385 716 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF385BQ569K4 471 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF628Q5EBL2 1059 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 RPUSD3Q6P087 351 aaKnown RBP14.12□□□□□ -0.15
UBE3B-201ENST00000340074 CYP4Z2PQ8N1L4 340 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 ZNF675Q8TD23 568 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 KAT2AQ92830 837 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 C5orf34Q96MH7 638 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 ANKRA2Q9H9E1 313 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 MEAF6Q9HAF1 191 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 BCAP29Q9UHQ4 241 aa14.12□□□□□ -0.15
UBE3B-201ENST00000340074 COPG1Q9Y678 874 aaKnown RBP14.12□□□□□ -0.15
UBE3B-201ENST00000340074 GCN1Q92616 2671 aaKnown RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 SLC25A12O75746 678 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 OR6B1O95007 311 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 CBX7O95931 251 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 SP1P08047 785 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 PRPS2P11908 318 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 PCSK2P16519 638 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 NCBP2P52298 156 aaKnown RBP eCLIP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 EMX2Q04743 252 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 DUSP8Q13202 625 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 MAD2L1Q13257 205 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 MAPKAPK3Q16644 382 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 PIGGQ5H8A4 983 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 IL20RBQ6UXL0 311 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 WDR75Q8IWA0 830 aaKnown RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 FAM9CQ8IZT9 166 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 OR52R1Q8NGF1 315 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 C16orf52Q8NHV5 167 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 LRRC8CQ8TDW0 803 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 DYDC1Q8WWB3 177 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 CIDECQ96AQ7 238 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 MIB2Q96AX9 1013 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 PPCDCQ96CD2 204 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 SCMH1Q96GD3 660 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 TAAR6Q96RI8 345 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 GLIPR2Q9H4G4 154 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 NOP53Q9NZM5 478 aaKnown RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 SH3BP4Q9P0V3 963 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 ERVK-11Q9UQG0 969 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 EIF3LQ9Y262 564 aaKnown RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 DTX4Q9Y2E6 619 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 PCDHGB6Q9Y5F9 930 aa14.11□□□□□ -0.15
UBE3B-201ENST00000340074 FASNP49327 2511 aaKnown RBP14.11□□□□□ -0.15
UBE3B-201ENST00000340074 A8MVJ9 347 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 J3QKU1 62 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 SCAMP2O15127 329 aaKnown RBP14.1□□□□□ -0.15
UBE3B-201ENST00000340074 HDAC3O15379 428 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 TBX19O60806 448 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 NADKO95544 446 aaPredicted RBP14.1□□□□□ -0.15
UBE3B-201ENST00000340074 G6PDP11413 515 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 NTSP30990 170 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 NR0B1P51843 470 aaKnown RBP14.1□□□□□ -0.15
UBE3B-201ENST00000340074 FOXK1P85037 733 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 PDE7AQ13946 482 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 SMU1Q2TAY7 513 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 SLC25A25Q6KCM7 469 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 GALNTL5Q7Z4T8 443 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 MDGA2Q7Z553 956 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 TMEM178AQ8NBL3 297 aa14.1□□□□□ -0.15
UBE3B-201ENST00000340074 SLC22A8Q8TCC7 542 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms