RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 GALNTL6Q49A17 601 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 ABHD17CQ6PCB6 329 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 XKRXQ6PP77 449 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 ZNF793Q6ZN11 406 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 GDF7Q7Z4P5 450 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 RPS19BP1Q86WX3 136 aaKnown RBP13.69□□□□□ -0.22
TSPO-201ENST00000329563 MCEMP1Q8IX19 187 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 LGI4Q8N135 537 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 ARMC10Q8N2F6 343 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 METTL4Q8N3J2 472 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 RNF175Q8N4F7 328 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 FAM47BQ8NA70 645 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 THAP3Q8WTV1 239 aaPredicted RBP13.69□□□□□ -0.22
TSPO-201ENST00000329563 ITLN2Q8WWU7 325 aaPredicted RBP13.69□□□□□ -0.22
TSPO-201ENST00000329563 CCDC120Q96HB5 630 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 FRMD6Q96NE9 622 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 F2RL3Q96RI0 385 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 TSPAN10Q9H1Z9 355 aaPredicted RBP13.69□□□□□ -0.22
TSPO-201ENST00000329563 ASIC5Q9NY37 505 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 WBP11Q9Y2W2 641 aaKnown RBP13.69□□□□□ -0.22
TSPO-201ENST00000329563 PTGDR2Q9Y5Y4 395 aa13.69□□□□□ -0.22
TSPO-201ENST00000329563 NCOA6Q14686 2063 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 TACC2O95359 2948 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 MYOCOSA0A1B0GUC4 107 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 PSMD12O00232 456 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 RTCAO00442 366 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 SLC19A2O60779 497 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 COX6B1P14854 86 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 IDO1P14902 403 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 AGAP20933 346 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 LIM2P55344 173 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 MLF1P58340 268 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 ALDH6A1Q02252 535 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 GABPB1Q06547 395 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 TBL3Q12788 808 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 KIAA0040Q15053 153 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 RNFT1Q5M7Z0 435 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 OR4C11Q6IEV9 310 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 GALNTL5Q7Z4T8 443 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 NUDT13Q86X67 352 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 EID3Q8N140 333 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 NPLQ9BXD5 320 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 MRPL1Q9BYD6 325 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 DDX31Q9H8H2 851 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 TRIM45Q9H8W5 580 aaPredicted RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 TMEM45AQ9NWC5 275 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 KCMF1Q9P0J7 381 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 LRFN1Q9P244 771 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 HEY2Q9UBP5 337 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 MCM8Q9UJA3 840 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 DAPP1Q9UN19 280 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 PPIEQ9UNP9 301 aaKnown RBP13.68□□□□□ -0.22
TSPO-201ENST00000329563 MAPRE3Q9UPY8 281 aa13.68□□□□□ -0.22
TSPO-201ENST00000329563 ANKRD17O75179 2603 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 TMEM200CA6NKL6 621 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 E9PBE3 544 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 PLPP1O14494 284 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 GUCY1B2O75343 617 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 SH3BGRLO75368 114 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 ETHE1O95571 254 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 SP1P08047 785 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 NCF2P19878 526 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 HTR1EP28566 365 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 ADSLP30566 484 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 HSD17B7P56937 341 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 STX1BP61266 288 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 TRA2BP62995 288 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 RPL38P63173 70 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 OC90Q02509 493 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
TSPO-201ENST00000329563 RPS6KA2Q15349 733 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 COMMD6Q7Z4G1 85 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 SIAH3Q8IW03 269 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 CHERPQ8IWX8 916 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 C1orf52Q8N6N3 182 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 B3GNT7Q8NFL0 401 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 C11orf24Q96F05 449 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 APIPQ96GX9 242 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 FCRL1Q96LA6 429 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 SORBS1Q9BX66 1292 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 COPS7BQ9H9Q2 264 aaPredicted RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 PRTFDC1Q9NRG1 225 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 PNO1Q9NRX1 252 aaKnown RBP13.67□□□□□ -0.22
TSPO-201ENST00000329563 SH3BGRL2Q9UJC5 107 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 OTOGQ6ZRI0 2925 aa13.67□□□□□ -0.22
TSPO-201ENST00000329563 F8P00451 2351 aa13.66□□□□□ -0.22
TSPO-201ENST00000329563 TRBV11-1A0A0K0K1C0 115 aa13.66□□□□□ -0.22
TSPO-201ENST00000329563 SLC22A2O15244 555 aa13.66□□□□□ -0.22
TSPO-201ENST00000329563 B3GALT2O43825 422 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms