RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RAB42Q8N4Z0 105 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 BBS10Q8TAM1 723 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 ASB16Q96NS5 453 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 FERD3LQ96RJ6 166 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 TEX101Q9BY14 249 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 SLC35C2Q9NQQ7 365 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 ZCCHC3Q9NUD5 404 aaKnown RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 CRNNQ9UBG3 495 aaPredicted RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 TRPC4Q9UBN4 977 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 DPP7Q9UHL4 492 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 NUMA1Q14980 2115 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 LRIT2A6NDA9 550 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 ANTXRLA6NF34 631 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 SPNP16150 400 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 SOX3P41225 446 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 KHKP50053 298 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 COX10Q12887 443 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 KRR1Q13601 381 aaKnown RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 MLF2Q15773 248 aaPredicted RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 NDUFA9Q16795 377 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 SZRD1Q7Z422 152 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 ADCK2Q7Z695 626 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 NANOGP1Q8N7R0 232 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 C17orf62Q9BQA9 187 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 POLDIP3Q9BY77 421 aaKnown RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 BCL2L10Q9HD36 194 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 THAP10Q9P2Z0 257 aaPredicted RBP20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 SEC14L4Q9UDX3 406 aa20.43■□□□□ 0.86
SH2D3A-201ENST00000245908 TRPM6Q9BX84 2022 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TBC1D3BA6NDS4 549 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 GPR89AB7ZAQ6 455 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TNFRSF10AO00220 468 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SERPIND1P05546 499 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 GPR89BP0CG08 455 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 NR4A2P43354 598 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TAS2R38P59533 333 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TMEM35AQ53FP2 167 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 LINC00471Q8N535 108 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 FAM26EQ8N5C1 309 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 Q8N9G6 341 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 PROKR2Q8NFJ6 384 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TTLQ8NG68 377 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 INSM2Q96T92 566 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 CNPPD1Q9BV87 410 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 FNDC11Q9BVV2 318 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 FAIM2Q9BWQ8 316 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 ASPNQ9BXN1 380 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 C3orf14Q9HBI5 128 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 MAN2C1Q9NTJ4 1040 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 HCN2Q9UL51 889 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SLC9A8Q9Y2E8 581 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 CAB39Q9Y376 341 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TNNI3P19429 210 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 NTSP30990 170 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 NCBP2P52298 156 aaKnown RBP eCLIP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 HTRA3P83110 453 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SLC25A30Q5SVS4 291 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 TMEM64Q6YI46 380 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 C12orf76Q8N812 135 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 OR2A1Q8NGT9 310 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SMARCD2Q92925 531 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 C12orf66Q96MD2 445 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SDHCQ99643 169 aaPredicted RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 KCNS3Q9BQ31 491 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SPATA5L1Q9BVQ7 753 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 KCNK12Q9HB15 430 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 SMURF1Q9HCE7 757 aa20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 MBNL1Q9NR56 388 aaKnown RBP20.42■□□□□ 0.86
SH2D3A-201ENST00000245908 LINC01553A4QN01 128 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 FAM172BPA6NC97 362 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 MAN2B1O00754 1011 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 CTDSP2O14595 271 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 EPPINO95925 133 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 MMP11P24347 488 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 CRYBB2P43320 205 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 ZIC1Q15915 447 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 BCDIN3DQ7Z5W3 292 aaKnown RBP20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 IQCF1Q8N6M8 205 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 CAMK1GQ96NX5 476 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 CCDC32Q9BV29 185 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 NEK6Q9HC98 313 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 EXOSC4Q9NPD3 245 aaKnown RBP20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 NDUFB11Q9NX14 153 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 TVP23BQ9NYZ1 205 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 STUB1Q9UNE7 303 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 RWDD3Q9Y3V2 267 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 PDZK1P1A8MUH7 402 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 LGI1O95970 557 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 HBQ1P09105 142 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 RAB28P51157 221 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 NKX2-5P52952 324 aaPredicted RBP20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 DEFA1P59665 94 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 DEFA3P59666 94 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 AGBL4Q5VU57 503 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 ZER1Q7Z7L7 766 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 CACTIN-AS1Q8N1I8 211 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 OR4K5Q8NGD3 323 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 SFXN5Q8TD22 340 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 SLC30A2Q9BRI3 323 aa20.41■□□□□ 0.86
SH2D3A-201ENST00000245908 KLHL31Q9H511 634 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms