RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 TRMT12Q53H54 448 aaKnown RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 TTMPQ5BVD1 217 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 PIGGQ5H8A4 983 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 C6orf163Q5TEZ5 329 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 ANKRD26P1Q6NSI1 321 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 SLC29A4Q7RTT9 530 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 HDXQ7Z353 690 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 MDGA2Q7Z553 956 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 ATCAYQ86WG3 371 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 CYP4Z2PQ8N1L4 340 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 VWA5B2Q8N398 1253 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 HORMAD2Q8N7B1 307 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 ZNF615Q8N8J6 731 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 GALNT11Q8NCW6 608 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 NUBPLQ8TB37 319 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 FAR1Q8WVX9 515 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 KAT2AQ92830 837 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 METTL2AQ96IZ6 378 aaKnown RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 FCRL1Q96LA6 429 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 TSSK3Q96PN8 268 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 BARD1Q99728 777 aaKnown RBP11.74□□□□□ -0.53
LSM5-201ENST00000223084 WWTR1Q9GZV5 400 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 OR10A5Q9H207 317 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 SLC35C2Q9NQQ7 365 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.74□□□□□ -0.53
LSM5-201ENST00000223084 HPF1Q9NWY4 346 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 NKIRAS1Q9NYS0 192 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 BCAP29Q9UHQ4 241 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 ERVK-11Q9UQG0 969 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 DTX4Q9Y2E6 619 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 RAP2CQ9Y3L5 183 aa11.74□□□□□ -0.53
LSM5-201ENST00000223084 NME6O75414 186 aaPredicted RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 WISP2O76076 250 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 NADKO95544 446 aaPredicted RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 GRK2P25098 689 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 MAP4K2Q12851 820 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 EBPQ15125 230 aaKnown RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 ZNF324BQ6AW86 544 aaPredicted RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 TMEM64Q6YI46 380 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 BCORP1Q8N888 145 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 C16orf52Q8NHV5 167 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 USP9XQ93008 2570 aaPredicted RBP11.73□□□□□ -0.53
LSM5-201ENST00000223084 TMEM125Q96AQ2 219 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 PPP3R2Q96LZ3 170 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 BBS4Q96RK4 519 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 CCT7Q99832 543 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 C1orf50Q9BV19 199 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 MIEF1Q9NQG6 463 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 AGPAT4Q9NRZ5 378 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 GIMAP4Q9NUV9 329 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 PNPOQ9NVS9 261 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 EHD3Q9NZN3 535 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 ZNF639Q9UID6 485 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
LSM5-201ENST00000223084 NINQ8N4C6 2090 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 C2orf92A0A1B0GVN3 265 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 OR6C76A6NM76 312 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 MYO1GB0I1T2 1018 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 G3V3Y1 287 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CDK2AP1O14519 115 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 NME2P1O60361 137 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CBX6O95503 412 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CBX7O95931 251 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 BCKDHAP12694 445 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 NME2P22392 152 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 MST1P26927 711 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 RPL14P50914 215 aaKnown RBP11.72□□□□□ -0.53
LSM5-201ENST00000223084 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
LSM5-201ENST00000223084 SLC18A1P54219 525 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 GPR85P60893 370 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CEBPEQ15744 281 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 INAQ16352 499 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 MPEG1Q2M385 716 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ATP6AP1LQ52LC2 224 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ZNF385BQ569K4 471 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ZNF628Q5EBL2 1059 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 C6orf136Q5SQH8 315 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 LYPD8Q6UX82 237 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 IKBIPQ70UQ0 350 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 SULF2Q8IWU5 870 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 LIX1Q8N485 282 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ZNF441Q8N8Z8 693 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 TMEM178AQ8NBL3 297 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 OR7G1Q8NGA0 311 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ADIPOR1Q96A54 375 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CTHRC1Q96CG8 243 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 TUBGCP3Q96CW5 907 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 ATP6V1G3Q96LB4 118 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 CLMPQ9H6B4 373 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 OLAHQ9NV23 265 aa11.72□□□□□ -0.53
LSM5-201ENST00000223084 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.72□□□□□ -0.53
LSM5-201ENST00000223084 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
LSM5-201ENST00000223084 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms