RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 C14orf28Q4W4Y0 310 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 TCTE1Q5JU00 501 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 TMTC4Q5T4D3 741 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 GARNL3Q5VVW2 1013 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 FBXO42Q6P3S6 717 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 CYP2R1Q6VVX0 501 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 RNF175Q8N4F7 328 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ARL10Q8N8L6 244 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ACOT4Q8N9L9 421 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 FLVCR1-AS1Q8TAF5 88 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 RASSF5Q8WWW0 418 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 LZICQ8WZA0 190 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 EME1Q96AY2 570 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 DPYSL5Q9BPU6 564 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 DCAF13Q9NV06 445 aaKnown RBP16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ADPRHL2Q9NX46 363 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 PILRAQ9UKJ1 303 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 PACSIN3Q9UKS6 424 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 BAG5Q9UL15 447 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 RAB26Q9ULW5 256 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 AURKCQ9UQB9 309 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ENTPD4Q9Y227 616 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 ZNF780BQ9Y6R6 833 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 UNC13CQ8NB66 2214 aa16.22■□□□□ 0.19
PHGDH-234ENST00000642041 CREG1O75629 220 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 PDE9AO76083 593 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 TBX6O95947 436 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 LDLRP01130 860 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 SMIM10L1P0DMW3 83 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 PNLIPP16233 465 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 CD82P27701 267 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 PPP2R1BP30154 601 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 MSX2P35548 267 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 CHI3L1P36222 383 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 GZMMP51124 257 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 ARHGDIAP52565 204 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 GPLD1P80108 840 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 EPS8Q12929 822 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 MSRB3Q8IXL7 192 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 OR10G6Q8NH81 332 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 C9orf43Q8TAL5 461 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 SFXN5Q8TD22 340 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 SSC4DQ8WTU2 575 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 TBC1D20Q96BZ9 403 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 SMIM10Q96HG1 83 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 NR1H4Q96RI1 486 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 C17orf62Q9BQA9 187 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 C3orf14Q9HBI5 128 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 SLC35C2Q9NQQ7 365 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 ZNF71Q9NQZ8 489 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 RIMS3Q9UJD0 308 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 PADI4Q9UM07 663 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 FAF1Q9UNN5 650 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 DTNAQ9Y4J8 743 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 LOXL2Q9Y4K0 774 aa16.21■□□□□ 0.19
PHGDH-234ENST00000642041 ARHGEF17Q96PE2 2063 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-234ENST00000642041 TRBV23OR9-2A0A075B6M9 112 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 TCRBV5S2A0A599 114 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 D6RAR5 112 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 SAP18O00422 153 aaKnown RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 DPM1O60762 260 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 AGR2O95994 175 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CSNK2A2P19784 350 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 MAGP20916 626 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 ATP6V1B2P21281 511 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CDH3P22223 829 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 PCGF2P35227 344 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CAPZBP47756 277 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 PLA2G16P53816 162 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 OR4D2P58180 307 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CEBPEQ15744 281 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CLPPQ16740 277 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 GRAMD1BQ3KR37 738 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 FHL5Q5TD97 284 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 NDUFAF5Q5TEU4 345 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 ADNP2Q6IQ32 1131 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 UBE3DQ7Z6J8 389 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 ANKRD46Q86W74 232 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 KMT5CQ86Y97 462 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 PLXDC1Q8IUK5 500 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 ADGRG5Q8IZF4 528 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 DTWD1Q8N5C7 304 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 PATE1Q8WXA2 126 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 FIG4Q92562 907 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 MIEF2Q96C03 454 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 SDCCAG3Q96C92 435 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 BBS4Q96RK4 519 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 GFM1Q96RP9 751 aaKnown RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 SLC35A5Q9BS91 424 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 INPP5KQ9BT40 448 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 ENAMQ9NRM1 1142 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 FOXJ2Q9P0K8 574 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 EXO1Q9UQ84 846 aaKnown RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 SETD2Q9BYW2 2564 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-234ENST00000642041 CSMD1Q96PZ7 3565 aa16.2■□□□□ 0.18
PHGDH-234ENST00000642041 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-234ENST00000642041 SH3BGRLO75368 114 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 GLB1P16278 677 aa16.19■□□□□ 0.18
PHGDH-234ENST00000642041 ALOX12P18054 663 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms