RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SYPL1Q16563 259 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 FAM92BQ6ZTR7 304 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 KRT73Q86Y46 540 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 MUS81Q96NY9 551 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 ERVMER34-1Q9H9K5 563 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 TMEFF2Q9UIK5 374 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-208ENST00000641023 IFNW1P05000 195 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 PORP16435 677 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 HOXA6P31267 233 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 EPHA4P54764 986 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 SKP1P63208 163 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 KCNAB2Q13303 367 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 LAPTM4AQ15012 233 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 DNAJC22Q8N4W6 341 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TSPAN14Q8NG11 270 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 PROX1Q92786 737 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 FAM192AQ9GZU8 254 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 RAB33BQ9H082 229 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 EXD2Q9NVH0 621 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 DDX18Q9NVP1 670 aaKnown RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 KIF17Q9P2E2 1029 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 SEC14L3Q9UDX4 400 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 MYOCOSA0A1B0GUC4 107 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TNFRSF11BO00300 401 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 ASNA1O43681 348 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 DNAJB5O75953 348 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 FESP07332 822 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 CPMP14384 443 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 ATP6V1B1P15313 513 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 CDH2P19022 906 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 RPL5P46777 297 aaKnown RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 CYP27C1Q4G0S4 372 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 RNF220Q5VTB9 566 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 ANKRD34AQ69YU3 496 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 KDM4DQ6B0I6 523 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 NIPAL1Q6NVV3 410 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TSSK4Q6SA08 328 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 OR4N5Q8IXE1 308 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 C8orf59Q8N0T1 100 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 ATG16L2Q8NAA4 619 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 PIK3C3Q8NEB9 887 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 KAT2AQ92830 837 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TANKQ92844 425 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 ZDHHC12Q96GR4 267 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 COL21A1Q96P44 957 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 MBOAT4Q96T53 435 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 BARD1Q99728 777 aaKnown RBP16.25■□□□□ 0.19
PHGDH-208ENST00000641023 YIPF4Q9BSR8 244 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 AMBRA1Q9C0C7 1298 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 BCL2L10Q9HD36 194 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 THEGQ9P2T0 379 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 LRIT1Q9P2V4 623 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 TESMINQ9Y4I5 508 aa16.25■□□□□ 0.19
PHGDH-208ENST00000641023 LOC100130705A0A1B0GUX0 176 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 A0A1B0GVT2 93 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 PRAMEF27A3QJZ7 478 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 DUXAA6NLW8 204 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 CYR61O00622 381 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 ALDH4A1P30038 563 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 DAPP51397 102 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 LTB4RQ15722 352 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 NDUFA9Q16795 377 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 KCTD21Q4G0X4 260 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 CYP4Z1Q86W10 505 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 LGI4Q8N135 537 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 CA13Q8N1Q1 262 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 OR5T3Q8NGG3 340 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 BBS10Q8TAM1 723 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 TGM7Q96PF1 710 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 YTHDF1Q9BYJ9 559 aaKnown RBP16.24■□□□□ 0.19
PHGDH-208ENST00000641023 ING2Q9H160 280 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 TMEM74BQ9NUR3 256 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 EPHA6Q9UF33 1036 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 GPC6Q9Y625 555 aaPredicted RBP16.24■□□□□ 0.19
PHGDH-208ENST00000641023 CSNK1G3Q9Y6M4 447 aa16.24■□□□□ 0.19
PHGDH-208ENST00000641023 TLCD2A6NGC4 264 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 PRAMEF25A6NGN4 478 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 SGK494L7N484 410 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 JRKO75564 520 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 LINGO3P0C6S8 592 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 GNSP15586 552 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 RHCEP18577 417 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 TPD52P55327 224 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-208ENST00000641023 SHC2P98077 582 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 IL1RL1Q01638 556 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 APOFQ13790 326 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 C6orf132Q5T0Z8 1188 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 THAP5Q7Z6K1 395 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 TTC29Q8NA56 475 aaPredicted RBP16.23■□□□□ 0.19
PHGDH-208ENST00000641023 NCSTNQ92542 709 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 C16orf58Q96GQ5 468 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 AHCYL2Q96HN2 611 aaKnown RBP16.23■□□□□ 0.19
PHGDH-208ENST00000641023 ZNF354BQ96LW1 612 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 OR7D2Q96RA2 312 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 PIP5K1AQ99755 562 aa16.23■□□□□ 0.19
PHGDH-208ENST00000641023 ACTRT3Q9BYD9 372 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms