RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 CXorf21Q9HAI6 301 aa20.14■□□□□ 0.81
TSPAN9-208ENST00000640568 SLAMF7Q9NQ25 335 aa20.14■□□□□ 0.81
TSPAN9-208ENST00000640568 COPS7AQ9UBW8 275 aa20.14■□□□□ 0.81
TSPAN9-208ENST00000640568 PCDHGB4Q9UN71 923 aa20.14■□□□□ 0.81
TSPAN9-208ENST00000640568 CCDC154A6NI56 674 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 ARGFXA6NJG6 315 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 K7ENP7 123 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 RNASET2O00584 256 aaKnown RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 FCHO1O14526 889 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 DCTN3O75935 186 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 SLITRK5O94991 958 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 ICAM2P13598 275 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 PTGER1P34995 402 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 FRKP42685 505 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 SLC26A5P58743 744 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 VAC14Q08AM6 782 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 LTB4RQ15722 352 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 PRICKLE4Q2TBC4 344 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 DEFB109BQ30KR1 87 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 TIGD2Q4W5G0 525 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 INO80CQ6PI98 192 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 DGAT2L6Q6ZPD8 337 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 ZNF551Q7Z340 670 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 VWA5B2Q8N398 1253 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 TMEM102Q8N9M5 508 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 B3GNT7Q8NFL0 401 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 SLC2A12Q8TD20 617 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 DOK4Q8TEW6 326 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 RMND5AQ9H871 391 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 ERVK-19Q9WJR5 959 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 CAPN7Q9Y6W3 813 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 NUP214P35658 2090 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 IGF2RP11717 2491 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 PCSK5Q92824 1860 aa20.13■□□□□ 0.81
TSPAN9-208ENST00000640568 C6orf47O95873 294 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 ADSLP30566 484 aaPredicted RBP20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 AP2B1P63010 937 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 CXADRP78310 365 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 LRRC74AQ0VAA2 488 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 RCAN2Q14206 197 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 MLC1Q15049 377 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 MAPRE2Q15555 327 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 DCAF10Q5QP82 559 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 GK5Q6ZS86 529 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 ZNF675Q8TD23 568 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 OR5P2Q8WZ92 322 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 KAT2AQ92830 837 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 SPDL1Q96EA4 605 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 VMP1Q96GC9 406 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 NEUROD4Q9HD90 331 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 MAT2BQ9NZL9 334 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 ZMIZ1Q9ULJ6 1067 aa20.12■□□□□ 0.81
TSPAN9-208ENST00000640568 PRSS51A0A1B0GVH4 220 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 DYTNA2CJ06 578 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 SLC22A2O15244 555 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 CPSF4O95639 269 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ABCB1P08183 1280 aaPredicted RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 CT62P0C5K7 136 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 MRPS35P82673 323 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 MAP4K2Q12851 820 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 KLF10Q13118 480 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 MAPKAPK3Q16644 382 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ZNF628Q5EBL2 1059 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 PLAG1Q6DJT9 500 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 BLOC1S3Q6QNY0 202 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 FAM111BQ6SJ93 734 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 TMEM107Q6UX40 140 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ANKRD46Q86W74 232 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 FUNDC1Q8IVP5 155 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 OR4A15Q8NGL6 344 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 M1APQ8TC57 530 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 NCLNQ969V3 563 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 FBXL20Q96IG2 436 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 IMMP1LQ96LU5 166 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ATP13A2Q9NQ11 1180 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ARMCX1Q9P291 453 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 ZFP36L2P47974 494 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 CLCN2P51788 898 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 WNT3P56703 355 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 AIMP2Q13155 320 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 IRAK1BP1Q5VVH5 260 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 MSANTD1Q6ZTZ1 278 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 SZRD1Q7Z422 152 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 KBTBD2Q8IY47 623 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 CLECL1Q8IZS7 167 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 OR1N1Q8NGS0 311 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 VPS33AQ96AX1 596 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 SENP5Q96HI0 755 aaPredicted RBP20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 MAGED4Q96JG8 741 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 BCAP29Q9UHQ4 241 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 SNX8Q9Y5X2 465 aa20.11■□□□□ 0.81
TSPAN9-208ENST00000640568 BCAS2O75934 225 aaPredicted RBP20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 DDAH2O95865 285 aa20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 SNRPB2P08579 225 aaKnown RBP20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 SOAT1P35610 550 aa20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 MC3RP41968 323 aa20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 CDK9P50750 372 aaKnown RBP20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 PHC1P78364 1004 aa20.1■□□□□ 0.81
TSPAN9-208ENST00000640568 VPS26BQ4G0F5 336 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms