RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GSTM5P46439 218 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 SLC37A1P57057 533 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 HEPACAMQ14CZ8 416 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 OR1C1Q15619 314 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 LTB4RQ15722 352 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 PRICKLE4Q2TBC4 344 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 RPUSD3Q6P087 351 aaKnown RBP24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF615Q8N8J6 731 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 EXOSC8Q96B26 276 aaKnown RBP24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ATP6V1G3Q96LB4 118 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 TAAR6Q96RI8 345 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ASF1BQ9NVP2 202 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF639Q9UID6 485 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-231ENST00000640499 RAP2CQ9Y3L5 183 aa24.76■■□□□ 1.55
VEGFA-231ENST00000640499 J3QKU1 62 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 WWP2O00308 870 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 PRAMEF2O60811 474 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 OR2J2O76002 312 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 DDCP20711 480 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 NT5EP21589 574 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 HLCSP50747 726 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 DUSP8Q13202 625 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 CEBPEQ15744 281 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 ADCY4Q8NFM4 1077 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 SUN3Q8TAQ9 357 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 CTHRC1Q96CG8 243 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 SCMH1Q96GD3 660 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 PNPOQ9NVS9 261 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 MAT2BQ9NZL9 334 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 EHD3Q9NZN3 535 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 ABI3Q9P2A4 366 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 BAIAP2L1Q9UHR4 511 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 PSME2Q9UL46 239 aa24.75■■□□□ 1.55
VEGFA-231ENST00000640499 SNNO75324 88 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-231ENST00000640499 RPL38P63173 70 aaKnown RBP24.74■■□□□ 1.55
VEGFA-231ENST00000640499 MAP4K2Q12851 820 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 GALNTL6Q49A17 601 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 HOMEZQ8IX15 550 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 GALNT12Q8IXK2 581 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 CCDC116Q8IYX3 515 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 CDC26Q8NHZ8 85 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 ART5Q96L15 291 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 RASL10BQ96S79 203 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 SLC35C2Q9NQQ7 365 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF446Q9NWS9 450 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 TAS2R7Q9NYW3 318 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 LRFN1Q9P244 771 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 COPS7AQ9UBW8 275 aa24.74■■□□□ 1.55
VEGFA-231ENST00000640499 WBP11Q9Y2W2 641 aaKnown RBP24.74■■□□□ 1.55
VEGFA-231ENST00000640499 YARS2Q9Y2Z4 477 aaKnown RBP24.74■■□□□ 1.55
VEGFA-231ENST00000640499 CDK2AP1O14519 115 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 PEX11AO75192 247 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 NADKO95544 446 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-231ENST00000640499 BCKDHAP12694 445 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 RPL14P50914 215 aaKnown RBP24.73■■□□□ 1.55
VEGFA-231ENST00000640499 OC90Q02509 493 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF766Q5HY98 468 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 C6orf136Q5SQH8 315 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 TICAM1Q8IUC6 712 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 NUBPLQ8TB37 319 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 CCT7Q99832 543 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 NKIRAS1Q9NYS0 192 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF780BQ9Y6R6 833 aa24.73■■□□□ 1.55
VEGFA-231ENST00000640499 TENM4Q6N022 2769 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 FCHO1O14526 889 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 DYRK3O43781 588 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 OR6B1O95007 311 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 CYB561P49447 251 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 EBPQ15125 230 aaKnown RBP24.72■■□□□ 1.55
VEGFA-231ENST00000640499 TRMT12Q53H54 448 aaKnown RBP24.72■■□□□ 1.55
VEGFA-231ENST00000640499 PIGGQ5H8A4 983 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 LYPD8Q6UX82 237 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 RNF111Q6ZNA4 994 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 IKBIPQ70UQ0 350 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 LRRC25Q8N386 305 aaPredicted RBP24.72■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF441Q8N8Z8 693 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 OR5L2Q8NGL0 311 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 GRHL3Q8TE85 626 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 PPP3R2Q96LZ3 170 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 TSSK3Q96PN8 268 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 TMED5Q9Y3A6 229 aa24.72■■□□□ 1.55
VEGFA-231ENST00000640499 COPG1Q9Y678 874 aaKnown RBP24.72■■□□□ 1.55
VEGFA-231ENST00000640499 RELNP78509 3460 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 MYO1GB0I1T2 1018 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 SNUPNO95149 360 aaKnown RBP24.71■■□□□ 1.55
VEGFA-231ENST00000640499 CBX7O95931 251 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 SP1P08047 785 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 SOX3P41225 446 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 SSR4P51571 173 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 SRSF11Q05519 484 aaKnown RBP24.71■■□□□ 1.55
VEGFA-231ENST00000640499 PDCD2Q16342 344 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-231ENST00000640499 MPEG1Q2M385 716 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 ZNF628Q5EBL2 1059 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 MDGA2Q7Z553 956 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 CLHC1Q8NHS4 586 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 GFM2Q969S9 779 aaKnown RBP24.71■■□□□ 1.55
VEGFA-231ENST00000640499 WWTR1Q9GZV5 400 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 OR10A5Q9H207 317 aa24.71■■□□□ 1.55
VEGFA-231ENST00000640499 ANKRA2Q9H9E1 313 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms