RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 EXOSC8Q96B26 276 aaKnown RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 PELOQ9BRX2 385 aaKnown RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 ABI3Q9P2A4 366 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 COPS7AQ9UBW8 275 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 COPG1Q9Y678 874 aaKnown RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 POLEQ07864 2286 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 NUP214P35658 2090 aaPredicted RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 HSPA4LO95757 839 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 DRD2P14416 443 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 TRHRP34981 398 aaPredicted RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 SLC1A6P48664 564 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 RPL38P63173 70 aaKnown RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 PRICKLE4Q2TBC4 344 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 ZNF766Q5HY98 468 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 HHATQ5VTY9 493 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 GALNT12Q8IXK2 581 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 CCDC116Q8IYX3 515 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 C7orf57Q8NEG2 295 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 FCRL1Q96LA6 429 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 RASL10BQ96S79 203 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 BARD1Q99728 777 aaKnown RBP20.2■□□□□ 0.82
SCN1B-206ENST00000638536 BAIAP2L1Q9UHR4 511 aa20.2■□□□□ 0.82
SCN1B-206ENST00000638536 NINQ8N4C6 2090 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 TMEM114B3SHH9 223 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 WISP2O76076 250 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 HLCSP50747 726 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 PMP22Q01453 160 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 BST1Q10588 318 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 DUSP8Q13202 625 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 AGBL2Q5U5Z8 902 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 RPUSD3Q6P087 351 aaKnown RBP20.19■□□□□ 0.82
SCN1B-206ENST00000638536 OR8K3Q8NH51 312 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 FAM76AQ8TAV0 307 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 GRHL3Q8TE85 626 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 GFM2Q969S9 779 aaKnown RBP20.19■□□□□ 0.82
SCN1B-206ENST00000638536 TRIM45Q9H8W5 580 aaPredicted RBP20.19■□□□□ 0.82
SCN1B-206ENST00000638536 MYNNQ9NPC7 610 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 MAT2BQ9NZL9 334 aa20.19■□□□□ 0.82
SCN1B-206ENST00000638536 YARS2Q9Y2Z4 477 aaKnown RBP20.19■□□□□ 0.82
SCN1B-206ENST00000638536 USP9XQ93008 2570 aaPredicted RBP20.18■□□□□ 0.82
SCN1B-206ENST00000638536 TCP11X1B4DZS4 312 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 FCHO1O14526 889 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 PEX11AO75192 247 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 OR6B1O95007 311 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 WISP1O95388 367 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 ATP1B1P05026 303 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 NEFHP12036 1026 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 SDC1P18827 310 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 CSNK2A2P19784 350 aaPredicted RBP20.18■□□□□ 0.82
SCN1B-206ENST00000638536 DDCP20711 480 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 UQCRFS1P47985 274 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 CYB561P49447 251 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 FUT7Q11130 342 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 HEPACAMQ14CZ8 416 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 MDGA2Q7Z553 956 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 TICAM1Q8IUC6 712 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 ZNF615Q8N8J6 731 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 CLHC1Q8NHS4 586 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 SUN3Q8TAQ9 357 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 SCMH1Q96GD3 660 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 PPP1R36Q96LQ0 422 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 ANKRA2Q9H9E1 313 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 PSME2Q9UL46 239 aa20.18■□□□□ 0.82
SCN1B-206ENST00000638536 DYRK3O43781 588 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 SASH3O75995 380 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 SOX3P41225 446 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 SLC18A1P54219 525 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 MRPS35P82673 323 aaKnown RBP20.17■□□□□ 0.82
SCN1B-206ENST00000638536 STX3Q13277 289 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 TRMT12Q53H54 448 aaKnown RBP20.17■□□□□ 0.82
SCN1B-206ENST00000638536 RNF111Q6ZNA4 994 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 HDXQ7Z353 690 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 METTL2AQ96IZ6 378 aaKnown RBP20.17■□□□□ 0.82
SCN1B-206ENST00000638536 ART5Q96L15 291 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 BRINP2Q9C0B6 783 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 SLC35C2Q9NQQ7 365 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 DTX4Q9Y2E6 619 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 ZNF780BQ9Y6R6 833 aa20.17■□□□□ 0.82
SCN1B-206ENST00000638536 NME6O75414 186 aaPredicted RBP20.16■□□□□ 0.82
SCN1B-206ENST00000638536 SP1P08047 785 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 GRK2P25098 689 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 SSR4P51571 173 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 EXOSC7Q15024 291 aaKnown RBP20.16■□□□□ 0.82
SCN1B-206ENST00000638536 EBPQ15125 230 aaKnown RBP20.16■□□□□ 0.82
SCN1B-206ENST00000638536 ANKRD26P1Q6NSI1 321 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 GALNTL5Q7Z4T8 443 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 LRRC25Q8N386 305 aaPredicted RBP20.16■□□□□ 0.82
SCN1B-206ENST00000638536 TMEM156Q8N614 296 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 CTHRC1Q96CG8 243 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 TSSK3Q96PN8 268 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 GAL3ST4Q96RP7 486 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 SH3GL2Q99962 352 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 OR10A5Q9H207 317 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 PNPOQ9NVS9 261 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 ARGLU1Q9NWB6 273 aaPredicted RBP20.16■□□□□ 0.82
SCN1B-206ENST00000638536 ZNF639Q9UID6 485 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 RAP2CQ9Y3L5 183 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 EXPH5Q8NEV8 1989 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 SLC25A12O75746 678 aa20.16■□□□□ 0.82
SCN1B-206ENST00000638536 LRATO95237 230 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms