RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 IL1RAPQ9NPH3 570 aa11.85□□□□□ -0.51
LITAF-221ENST00000622633 MGAT4AQ9UM21 535 aa11.85□□□□□ -0.51
LITAF-221ENST00000622633 SAMD4AQ9UPU9 718 aaKnown RBP11.85□□□□□ -0.51
LITAF-221ENST00000622633 RNF6Q9Y252 685 aa11.85□□□□□ -0.51
LITAF-221ENST00000622633 THSD7BQ9C0I4 1608 aa11.85□□□□□ -0.51
LITAF-221ENST00000622633 NUP214P35658 2090 aaPredicted RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 A8MXK9 166 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 LGALS8O00214 317 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CLIC1O00299 241 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 MYL12BO14950 172 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 SELENOFO60613 162 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CPSF4O95639 269 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 EFEMP2O95967 443 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 HIST1H2AGP0C0S8 130 aaPredicted RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 SMIM6P0DI80 62 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PRF1P14222 555 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 JUNDP17535 347 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 AMD1P17707 334 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 MYL12AP19105 171 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 HIST1H2ADP20671 130 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 AOAHP28039 575 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 SERPINA4P29622 427 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 MVKQ03426 396 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 SCN1BQ07699 218 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 CHMP1BQ7LBR1 199 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 LRRC70Q7Z2Q7 622 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 SFT2D1Q8WV19 159 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 ASB11Q8WXH4 323 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 HIST1H2AHQ96KK5 128 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PANX1Q96RD7 426 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 HIST1H2AJQ99878 128 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 P2RY13Q9BPV8 354 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 H2AFJQ9BTM1 129 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 DPH7Q9BTV6 452 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PTDSS2Q9BVG9 487 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PDP1Q9P0J1 537 aaPredicted RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 PIAS3Q9Y6X2 628 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 EFCAB10A6NFE3 127 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 AGAP14A8MT82 685 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PCDH17O14917 1159 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 MTX2O75431 263 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PRKRAO75569 313 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 KCNK5O95279 499 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 IFNA4P05014 189 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 S100PP25815 95 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CTSKP43235 329 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 VLDLRP98155 873 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CAMK1Q14012 370 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 DUOXA1Q1HG43 343 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 FRG2Q64ET8 278 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 LHX8Q68G74 356 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 VASNQ6EMK4 673 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 RTL10Q7L3V2 364 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 UBE2J2Q8N2K1 259 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 TTC29Q8NA56 475 aaPredicted RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 SETD9Q8NE22 299 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 ASZ1Q8WWH4 475 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 AUTS2Q8WXX7 1259 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 VOPP1Q96AW1 172 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 FRG2BQ96QU4 278 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 DPYSL5Q9BPU6 564 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 KCNS3Q9BQ31 491 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 MED18Q9BUE0 208 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 ITPAQ9BY32 194 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 LYARQ9NX58 379 aaKnown RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 GPN3Q9UHW5 284 aaPredicted RBP11.84□□□□□ -0.51
LITAF-221ENST00000622633 CD84Q9UIB8 345 aa11.84□□□□□ -0.51
LITAF-221ENST00000622633 LOC390937A0A1W2PQ73 354 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 M0R082 166 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 AKAP8O43823 692 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 MRPS14O60783 128 aaKnown RBP11.83□□□□□ -0.52
LITAF-221ENST00000622633 LATS1O95835 1130 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 LHCGRP22888 699 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 MAPK1P28482 360 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 KDELR2P33947 212 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 MAPK8P45983 427 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SLC6A12P48065 614 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CSNK1DP48730 415 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 LIMK1P53667 647 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 FGL2Q14314 439 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 TRAM2Q15035 370 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 VMACQ2NL98 169 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 ZNF528Q3MIS6 628 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 GGTA1PQ4G0N0 100 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SERPINA13PQ6UXR4 307 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 TPRG1Q6ZUI0 275 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SERPINA11Q86U17 422 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 SYT12Q8IV01 421 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 CLECL1Q8IZS7 167 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 L3MBTL4Q8NA19 623 aa11.83□□□□□ -0.52
LITAF-221ENST00000622633 OR2AP1Q8NGE2 309 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms