RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 ARHGAP24Q8N264 748 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 OR8J3Q8NGG0 315 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 KAT2AQ92830 837 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 TSLPQ969D9 159 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM125Q96AQ2 219 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 PPWD1Q96BP3 646 aaKnown RBP16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 MAGED4Q96JG8 741 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 DGAT2Q96PD7 388 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 CPPED1Q9BRF8 314 aaPredicted RBP16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC26A1Q9H2B4 701 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 CMTM6Q9NX76 183 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 ACSL6Q9UKU0 697 aa16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 PRPF19Q9UMS4 504 aaKnown RBP16.69■□□□□ 0.26
PTCHD3-202ENST00000622555 RNF103-CHMP3A0A140T963 221 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 VSTM2BA6NLU5 285 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 CLIC1O00299 241 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 CNOT3O75175 753 aaKnown RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 IFNA16P05015 189 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 HEXBP07686 556 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 CCNYL3P0C7X3 344 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 MRPL14Q6P1L8 145 aaKnown RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 ANGPTL8Q6UXH0 198 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 ZNF517Q6ZMY9 492 aaPredicted RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 SZRD1Q7Z422 152 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC15A3Q8IY34 581 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 ENDOVQ8N8Q3 282 aaKnown RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 PNPT1Q8TCS8 783 aaKnown RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 ZFP90Q8TF47 636 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 RBM18Q96H35 190 aaKnown RBP16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 CLPTM1LQ96KA5 538 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 SH3GL1Q99961 368 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 SPRY4Q9C004 299 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 IKZF5Q9H5V7 419 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 TPT1P8Q9HAU6 139 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM181Q9P2C4 612 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 PACSIN3Q9UKS6 424 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
PTCHD3-202ENST00000622555 IGKV3D-11A0A0A0MRZ8 115 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 EVPLLA8MZ36 301 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 NME4O00746 187 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 RECKO95980 971 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 C1QCP02747 245 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 RBMS1P29558 406 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 MC3RP41968 323 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 STT3AP46977 705 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 CCT3P49368 545 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 EFNA3P52797 238 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 MRPS35P82673 323 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 BIKQ13323 160 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 NSDHLQ15738 373 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 WLSQ5T9L3 541 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 CPZQ66K79 652 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 TIPARPQ7Z3E1 657 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 DOK4Q8TEW6 326 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 ELP4Q96EB1 424 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 PELOQ9BRX2 385 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 B3GNT4Q9C0J1 378 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 WDR54Q9H977 334 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 RNPEPL1Q9HAU8 725 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 ABCD2Q9UBJ2 740 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 NXT1Q9UKK6 140 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 IDSB3KWA1 339 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 PDE5AO76074 875 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 PPIBP23284 216 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC5A2P31639 672 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 NCF4Q15080 339 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 ZNF628Q5EBL2 1059 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 FAAH2Q6GMR7 532 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM64Q6YI46 380 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 DGAT2L6Q6ZPD8 337 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 RNF148Q8N7C7 305 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 PLPP5Q8NEB5 264 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 SFXN5Q8TD22 340 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 RIT1Q92963 219 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 SLC46A1Q96NT5 459 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 SPSB2Q99619 263 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM121BQ9BXQ6 578 aaPredicted RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 C3orf14Q9HBI5 128 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 PNO1Q9NRX1 252 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 ZCCHC3Q9NUD5 404 aaKnown RBP16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 C3orf18Q9UK00 162 aa16.67■□□□□ 0.26
PTCHD3-202ENST00000622555 TCRBV16S1A1N1A0A5B0 115 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 EMC8O43402 210 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 KRT75O95678 551 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 TNNI3P19429 210 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 EMP2P54851 167 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 PRR5P85299 388 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 TP53BP2Q13625 1128 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 PRICKLE4Q2TBC4 344 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 SAMD4BQ5PRF9 694 aaKnown RBP16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 FAM111BQ6SJ93 734 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 TMEM151BQ8IW70 566 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 GALNT12Q8IXK2 581 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 ESX1Q8N693 406 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 C7orf57Q8NEG2 295 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms