RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ABHD17CQ6PCB6 329 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 KRT73Q86Y46 540 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 HDDC3Q8N4P3 179 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 LINC00471Q8N535 108 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 SUN3Q8TAQ9 357 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 ITPKCQ96DU7 683 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 CENPOQ9BU64 300 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 PLA2G2FQ9BZM2 168 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 RACGAP1Q9H0H5 632 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 OR51E2Q9H255 320 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 KLHL31Q9H511 634 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 MAN2C1Q9NTJ4 1040 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 TAS2R16Q9NYV7 291 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 MKLN1Q9UL63 735 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 XIRP2A4UGR9 3374 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 NINQ8N4C6 2090 aa8.91□□□□□ -0.98
PDPN-212ENST00000621990 A0A1W2PP55 124 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SAGE2PA6NJ88 616 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ENTPD6O75354 484 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 UPK1BO75841 260 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 PAK4O96013 591 aaPredicted RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 PPP2R1BP30154 601 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ETV6P41212 452 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MAN2A2P49641 1150 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 RPS3AP61247 264 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 PRKCDQ05655 676 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 COX10Q12887 443 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SLC9A5Q14940 896 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 UAP1L1Q3KQV9 507 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 PERM1Q5SV97 790 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR2L3Q8NG85 312 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR52E1Q8NGJ3 308 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR5D16Q8NGK9 328 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR8J1Q8NGP2 316 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 FGF11Q92914 225 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MOAP1Q96BY2 351 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR5M11Q96RB7 305 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MGLLQ99685 303 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SPATA5L1Q9BVQ7 753 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MTIF3Q9H2K0 278 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 XKR8Q9H6D3 395 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ZCCHC3Q9NUD5 404 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 IMP3Q9NV31 184 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CES1P1Q9UKY3 287 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MYO10Q9HD67 2058 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 A0A1W2PR48 441 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CCRL2O00421 344 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 HAT1O14929 419 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CASC3O15234 703 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 PLRG1O43660 514 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR10H3O60404 316 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 UGT2B17O75795 530 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 LGI1O95970 557 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 APODP05090 189 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SCG5P05408 212 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CHRM4P08173 479 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ATP5A1P25705 553 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 PEBP1P30086 187 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 NTSP30990 170 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CSTF2P33240 577 aaKnown RBP eCLIP8.9□□□□□ -0.98
PDPN-212ENST00000621990 NCBP2P52298 156 aaKnown RBP eCLIP8.9□□□□□ -0.98
PDPN-212ENST00000621990 EFNB1P98172 346 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 CDC20Q12834 499 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 GNA13Q14344 377 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 NCF4Q15080 339 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SSX1Q16384 188 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 NDUFA9Q16795 377 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ZNF181Q2M3W8 571 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 TIMM50Q3ZCQ8 353 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 AGAP7PQ5VUJ5 663 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 KIAA1211LQ6NV74 962 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 BHLHB9Q6PI77 547 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 DEF8Q6ZN54 512 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SNX29P2Q8IUI4 249 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 ACOT4Q8N9L9 421 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MORN4Q8NDC4 146 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 OR2L5Q8NG80 312 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SLC6A18Q96N87 628 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 POLR2J3Q9H1A7 115 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 OSGEPL1Q9H4B0 414 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 MRPS30Q9NP92 439 aaKnown RBP8.9□□□□□ -0.98
PDPN-212ENST00000621990 C11orf16Q9NQ32 467 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 KCNK6Q9Y257 313 aa8.9□□□□□ -0.98
PDPN-212ENST00000621990 SNRNP200O75643 2136 aaKnown RBP8.9□□□□□ -0.99
PDPN-212ENST00000621990 UNC80Q8N2C7 3258 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SH3BP5O60239 455 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 GUCY1B2O75343 617 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 NR2F1P10589 423 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ANXA11P50995 505 aaKnown RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 XKP51811 444 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZNF45Q02386 682 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SLAMF1Q13291 335 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 GPR19Q15760 415 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SOWAHCQ53LP3 525 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 MFSD4BQ5TF39 518 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZNF776Q68DI1 518 aaPredicted RBP8.89□□□□□ -0.99
PDPN-212ENST00000621990 ZNF425Q6IV72 752 aa8.89□□□□□ -0.99
PDPN-212ENST00000621990 SLC48A1Q6P1K1 146 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms