RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TRPC4Q9UBN4 977 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 BTNL2Q9UIR0 455 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 CDC14AQ9UNH5 594 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 ATMQ13315 3056 aa7.53□□□□□ -1.2
PCDH9-205ENST00000614931 A0A1W2PRB8 838 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 VSTM2BA6NLU5 285 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 RFXANKO14593 260 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SORBS2O94875 1100 aaKnown RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 GPR75O95800 540 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ABCB1P08183 1280 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 HBQ1P09105 142 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CSNK2A2P19784 350 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SLC6A2P23975 617 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 NTSP30990 170 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TLX1P31314 330 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 XKP51811 444 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 NCBP2P52298 156 aaKnown RBP eCLIP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 PSME3P61289 254 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 DCDP81605 110 aaKnown RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ABHD18Q0P651 414 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MGAT2Q10469 447 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 STX5Q13190 355 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 DUSP8Q13202 625 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MAP7Q14244 749 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 NKG7Q16617 165 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TBR1Q16650 682 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MMEL1Q495T6 779 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 RUNDC3AQ59EK9 446 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 RABL3Q5HYI8 236 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 C6orf10Q5SRN2 563 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 FHL5Q5TD97 284 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ANXA8L1Q5VT79 327 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CPZQ66K79 652 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MRPL14Q6P1L8 145 aaKnown RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CYB5D1Q6P9G0 228 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 FAM111BQ6SJ93 734 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF517Q6ZMY9 492 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 LANCL3Q6ZV70 420 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF771Q7L3S4 317 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 OVCH1Q7RTY7 1134 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ZNF595Q8IYB9 648 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 DEFB107AQ8IZN7 70 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 NLGN4XQ8N0W4 816 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 EXD3Q8N9H8 876 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SIMC1Q8NDZ2 872 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 NLGN4YQ8NFZ3 816 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 OR4K14Q8NGD5 310 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 OR9A2Q8NGT5 310 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 GOT1L1Q8NHS2 421 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 STT3BQ8TCJ2 826 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ADAMTS18Q8TE60 1221 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 OR5P2Q8WZ92 322 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 KAT2AQ92830 837 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TANKQ92844 425 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MR1Q95460 341 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TMEM125Q96AQ2 219 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ROPN1LQ96C74 230 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 LRRC58Q96CX6 371 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ITCHQ96J02 903 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CLPTM1LQ96KA5 538 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 OR1F2PQ96R84 312 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 BBS4Q96RK4 519 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SPSB2Q99619 263 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 PRPF18Q99633 342 aaKnown RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CGREF1Q99674 301 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 BTBD10Q9BSF8 475 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TUBB6Q9BUF5 446 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CADM1Q9BY67 442 aaKnown RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 TGIF2Q9GZN2 237 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 VN1R1Q9GZP7 353 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SLC26A1Q9H2B4 701 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 EPS8L2Q9H6S3 715 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 RMND5AQ9H871 391 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 EFCAB1Q9HAE3 211 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 MKKSQ9NPJ1 570 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ACSS1Q9NUB1 689 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-205ENST00000614931 CROTQ9UKG9 612 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 USP22Q9UPT9 525 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 ENTPD4Q9Y227 616 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 PCDHB14Q9Y5E9 798 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 DOCK10Q96BY6 2186 aa7.52□□□□□ -1.21
PCDH9-205ENST00000614931 LOC101059948A0A1B0GTJ6 334 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 HRKO00198 91 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 NME4O00746 187 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 CTNSO60931 367 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 NME6O75414 186 aaPredicted RBP7.51□□□□□ -1.21
PCDH9-205ENST00000614931 ERN1O75460 977 aaKnown RBP7.51□□□□□ -1.21
PCDH9-205ENST00000614931 ATP5HO75947 161 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 KCNH1O95259 989 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 UMODP07911 640 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 KRT16P08779 473 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 ZCCHC18P0CG32 403 aa7.51□□□□□ -1.21
PCDH9-205ENST00000614931 PORP16435 677 aaPredicted RBP7.51□□□□□ -1.21
PCDH9-205ENST00000614931 SOAT1P35610 550 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms