RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RBM18Q96H35 190 aaKnown RBP21.17■□□□□ 0.98
IRF3-228ENST00000601291 LRFN5Q96NI6 719 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 ALOXE3Q9BYJ1 711 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 ULBP3Q9BZM4 244 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 TRIM15Q9C019 465 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 TGIF2Q9GZN2 237 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 C14orf105Q9NVL8 296 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 DDX18Q9NVP1 670 aaKnown RBP21.17■□□□□ 0.98
IRF3-228ENST00000601291 PTGFRNQ9P2B2 879 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 SNX13Q9Y5W8 968 aa21.17■□□□□ 0.98
IRF3-228ENST00000601291 CUL9Q8IWT3 2517 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 SPAARA0A1B0GVQ0 90 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ELOVL7A1L3X0 281 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 MEN1O00255 615 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 PLOD2O00469 737 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ACOT8O14734 319 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 GMNNO75496 209 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ONECUT2O95948 504 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 C1QCP02747 245 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 KLK3P07288 261 aaPredicted RBP21.16■□□□□ 0.98
IRF3-228ENST00000601291 IFI6P09912 130 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 MAOAP21397 527 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 GZMMP51124 257 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 MVDP53602 400 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 OR4D2P58180 307 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ZNF628Q5EBL2 1059 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ERICH5Q6P6B1 374 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 DHFR2Q86XF0 187 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ZNF675Q8TD23 568 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 JADE3Q92613 823 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 KAT2AQ92830 837 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 SLC35G5Q96KT7 338 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 LRGUKQ96M69 825 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 PTCHD1Q96NR3 888 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 DGAT2Q96PD7 388 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 TAAR9Q96RI9 348 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 ASPSCR1Q9BZE9 553 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 IFT80Q9P2H3 777 aaPredicted RBP21.16■□□□□ 0.98
IRF3-228ENST00000601291 CTSFQ9UBX1 484 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 PISDQ9UG56 409 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 EGFL7Q9UHF1 273 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 MAGEL2Q9UJ55 1249 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 SPTBP11277 2137 aa21.16■□□□□ 0.98
IRF3-228ENST00000601291 IGLV3-12A0A075B6K2 115 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 MYOCOSA0A1B0GUC4 107 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 SYNDIG1LA6NDD5 238 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 PLD2O14939 933 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 GSTA4O15217 222 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 MAP7Q14244 749 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 FXNQ16595 210 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 VWA2Q5GFL6 755 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 MICU2Q8IYU8 434 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 C10orf111Q8N326 155 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 DDA1Q9BW61 102 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 TMEM121BQ9BXQ6 578 aaPredicted RBP21.15■□□□□ 0.98
IRF3-228ENST00000601291 SLC22A11Q9NSA0 550 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 ACTR3BQ9P1U1 418 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 RAPGEFL1Q9UHV5 662 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 USP22Q9UPT9 525 aa21.15■□□□□ 0.98
IRF3-228ENST00000601291 TGFBR3LH3BV60 316 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 MAGEA8P43361 318 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 STT3AP46977 705 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 ANXA11P50995 505 aaKnown RBP21.14■□□□□ 0.98
IRF3-228ENST00000601291 PRKAG1P54619 331 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 MRPS35P82673 323 aaKnown RBP21.14■□□□□ 0.98
IRF3-228ENST00000601291 PRICKLE4Q2TBC4 344 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 PROSER1Q86XN7 944 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 GALNT12Q8IXK2 581 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 NUP43Q8NFH3 380 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 BHLHE22Q8NFJ8 381 aaPredicted RBP21.14■□□□□ 0.98
IRF3-228ENST00000601291 OR7G2Q8NG99 324 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 WDR36Q8NI36 951 aaKnown RBP21.14■□□□□ 0.98
IRF3-228ENST00000601291 STT3BQ8TCJ2 826 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 STMN2Q93045 179 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 FKBP10Q96AY3 582 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 NECTIN3Q9NQS3 549 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 GPATCH2Q9NW75 528 aa21.14■□□□□ 0.98
IRF3-228ENST00000601291 A0A087WV62 115 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 ARPC2O15144 300 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 KCNK5O95279 499 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 IFNA16P05015 189 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 CEACAM1P13688 526 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 ETFAP13804 333 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 ZNF28P17035 718 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 SOX11P35716 441 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 ETV5P41161 510 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 COX20Q5RI15 118 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 GCNT6Q5T4J0 391 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 OVCH1Q7RTY7 1134 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 C10orf67Q8IYJ2 551 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 OR2L13Q8N349 312 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 HIPK4Q8NE63 616 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 PMEPA1Q969W9 287 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 PPWD1Q96BP3 646 aaKnown RBP21.14■□□□□ 0.97
IRF3-228ENST00000601291 MS4A4EQ96PG1 132 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 CHST8Q9H2A9 424 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 THUMPD1Q9NXG2 353 aaKnown RBP21.14■□□□□ 0.97
IRF3-228ENST00000601291 MAT2BQ9NZL9 334 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 NTMQ9P121 344 aa21.14■□□□□ 0.97
IRF3-228ENST00000601291 FAF1Q9UNN5 650 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms