RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 S1PR1P21453 382 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 MST1P26927 711 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 SOX3P41225 446 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 XKP51811 444 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 PMP22Q01453 160 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 MGAT2Q10469 447 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 MAP4K2Q12851 820 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF267Q14586 743 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-213ENST00000598355 PRICKLE4Q2TBC4 344 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF750Q32MQ0 723 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 PIGGQ5H8A4 983 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 CES4AQ5XG92 561 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 RNF111Q6ZNA4 994 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 Q6ZSR9 355 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 ZCCHC23Q6ZST2 131 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 FAM26EQ8N5C1 309 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 TMEM156Q8N614 296 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF615Q8N8J6 731 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 OR2T11Q8NH01 316 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 CNPPD1Q9BV87 410 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 WWTR1Q9GZV5 400 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 LIN28AQ9H9Z2 209 aaKnown RBP14.94□□□□□ -0.02
TRIM28-213ENST00000598355 MYNNQ9NPC7 610 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 RRAGDQ9NQL2 400 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-213ENST00000598355 KLHL1Q9NR64 748 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 MAT2BQ9NZL9 334 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 KLF13Q9Y2Y9 288 aaPredicted RBP14.94□□□□□ -0.02
TRIM28-213ENST00000598355 PTGDR2Q9Y5Y4 395 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 ICE1Q9Y2F5 2266 aa14.94□□□□□ -0.02
TRIM28-213ENST00000598355 GNG14A0A1W2PPG7 69 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 A8MVJ9 347 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 CTIFO43310 598 aaKnown RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 ERLIN1O75477 346 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 CRCPO75575 148 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 CSNK2A2P19784 350 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 SSTR4P31391 388 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 SERPINB4P48594 390 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 HEPACAMQ14CZ8 416 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 IMPG1Q17R60 797 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 XKR7Q5GH72 579 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 FAM71E1Q6IPT2 247 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 MDGA2Q7Z553 956 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 SIAH3Q8IW03 269 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 VWA5B2Q8N398 1253 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 SLC15A4Q8N697 577 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 GOLM1Q8NBJ4 401 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 PSD4Q8NDX1 1056 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 C17orf47Q8NEP4 570 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF675Q8TD23 568 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 ASB15Q8WXK1 588 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 TMEM125Q96AQ2 219 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF764Q96H86 408 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 EBPLQ9BY08 206 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 SH2D2AQ9NP31 389 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 HPF1Q9NWY4 346 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 TAS2R7Q9NYW3 318 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 PSME2Q9UL46 239 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 EXO1Q9UQ84 846 aaKnown RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 WBP11Q9Y2W2 641 aaKnown RBP14.93□□□□□ -0.02
TRIM28-213ENST00000598355 HECTD1Q9ULT8 2610 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 NINQ8N4C6 2090 aa14.93□□□□□ -0.02
TRIM28-213ENST00000598355 NCKAP5O14513 1909 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 TMEM233B4DJY2 109 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 SLC28A1O00337 649 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 LSM1O15116 133 aaKnown RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 BIRC5O15392 142 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 ZIC2O95409 532 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 ANXA4P09525 319 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 DDCP20711 480 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 DUSP8Q13202 625 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 UBAP2LQ14157 1087 aaKnown RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 MPP2Q14168 576 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 ZNF791Q3KP31 576 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 SPDYAQ5MJ70 313 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 OPN5Q6U736 354 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 IKBIPQ70UQ0 350 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 SLC29A4Q7RTT9 530 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 SAMD14Q8IZD0 417 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 CLYBLQ8N0X4 340 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 LRRC25Q8N386 305 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 ZFP62Q8NB50 900 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 POGLUT1Q8NBL1 392 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 FAM98AQ8NCA5 519 aaKnown RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 OR7G1Q8NGA0 311 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 DOK4Q8TEW6 326 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 TWIST2Q8WVJ9 160 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 ADIPOR1Q96A54 375 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 EML4Q9HC35 981 aaKnown RBP14.92□□□□□ -0.02
TRIM28-213ENST00000598355 C1orf109Q9NX04 203 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 UTS2RQ9UKP6 389 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 TRAF6Q9Y4K3 522 aa14.92□□□□□ -0.02
TRIM28-213ENST00000598355 NCOA6Q14686 2063 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-213ENST00000598355 RGS14O43566 566 aa14.91□□□□□ -0.02
TRIM28-213ENST00000598355 ERAL1O75616 437 aaKnown RBP14.91□□□□□ -0.02
TRIM28-213ENST00000598355 ZWINTO95229 277 aa14.91□□□□□ -0.02
TRIM28-213ENST00000598355 CHEK2O96017 543 aa14.91□□□□□ -0.02
TRIM28-213ENST00000598355 FEN1P39748 380 aaKnown RBP14.91□□□□□ -0.02
TRIM28-213ENST00000598355 ALDH9A1P49189 494 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms