RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 C1orf109Q9NX04 203 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF223Q9UK11 482 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 POLR3HQ9Y535 204 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 PCDHGB6Q9Y5F9 930 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 ACTL7BQ9Y614 415 aa9.35□□□□□ -0.91
BRCA1-227ENST00000591849 USP9XQ93008 2570 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-227ENST00000591849 C2orf92A0A1B0GVN3 265 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CAPN14A8MX76 684 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 HRKO00198 91 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 BIRC5O15392 142 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 PEX1O43933 1283 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 NEURL1O76050 574 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 OR6B1O95007 311 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 AGFG2O95081 481 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CBX6O95503 412 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 P04436 131 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SERPINE1P05121 402 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 FGF4P08620 206 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 EDN3P14138 238 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SSTR4P31391 388 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SOX3P41225 446 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 RAE1P78406 368 aaKnown RBP9.34□□□□□ -0.91
BRCA1-227ENST00000591849 PMP22Q01453 160 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 PLGLB1Q02325 96 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
BRCA1-227ENST00000591849 RBPJQ06330 500 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 ZNF763Q0D2J5 394 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CHI3L2Q15782 390 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SPRED3Q2MJR0 410 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 GALNTL6Q49A17 601 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 PIGGQ5H8A4 983 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 BEND6Q5SZJ8 279 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-227ENST00000591849 KANK2Q63ZY3 851 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 NOXRED1Q6NXP6 359 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 GFRALQ6UXV0 394 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 RTL4Q6ZR62 310 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CCDC116Q8IYX3 515 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 ARMC10Q8N2F6 343 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 VWA5B2Q8N398 1253 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 FAM26EQ8N5C1 309 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SLC15A4Q8N697 577 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 GOLGA6L1Q8N7Z2 621 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 OR7G1Q8NGA0 311 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 NUBPLQ8TB37 319 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 TWIST2Q8WVJ9 160 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 NR4A3Q92570 626 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 TAAR6Q96RI8 345 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 RASL10BQ96S79 203 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 OR10A5Q9H207 317 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 TNFRSF12AQ9NP84 129 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 NKIRAS1Q9NYS0 192 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 SEC14L3Q9UDX4 400 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CES1P1Q9UKY3 287 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 CFL2Q9Y281 166 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 WBP11Q9Y2W2 641 aaKnown RBP9.34□□□□□ -0.91
BRCA1-227ENST00000591849 DOCK10Q96BY6 2186 aa9.34□□□□□ -0.91
BRCA1-227ENST00000591849 A0A1W2PS29 197 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 TMEM114B3SHH9 223 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NPIPA5E9PKD4 350 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 PIP5K1BO14986 540 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NME2P1O60361 137 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 IGKV3-11P04433 115 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 DDX5P17844 614 aaKnown RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 DDCP20711 480 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NME2P22392 152 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 GRK2P25098 689 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MAPK1P28482 360 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NTSP30990 170 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MPIP34949 423 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MEOX1P50221 254 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NR0B1P51843 470 aaKnown RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 NRG3P56975 720 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SLC37A1P57057 533 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 RPL38P63173 70 aaKnown RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 STX3Q13277 289 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 UBAP2LQ14157 1087 aaKnown RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MPEG1Q2M385 716 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 ATP6AP1LQ52LC2 224 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 FAM180BQ6P0A1 224 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 GALNT18Q6P9A2 607 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 FAM111BQ6SJ93 734 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 TICAM1Q8IUC6 712 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SULF2Q8IWU5 870 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 C9orf40Q8IXQ3 194 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 POGLUT1Q8NBL1 392 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 FAM13CQ8NE31 585 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 ADCY4Q8NFM4 1077 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MGARPQ8TDB4 240 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SCMH1Q96GD3 660 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 METTL2AQ96IZ6 378 aaKnown RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SGCZQ96LD1 299 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 PPP3R2Q96LZ3 170 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 WWTR1Q9GZV5 400 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 TRIM45Q9H8W5 580 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-227ENST00000591849 MYNNQ9NPC7 610 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SLC35C2Q9NQQ7 365 aa9.33□□□□□ -0.92
BRCA1-227ENST00000591849 SIRT5Q9NXA8 310 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms