RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 MRGPRX1Q96LB2 322 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 AMDHD1Q96NU7 426 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 BBS4Q96RK4 519 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 NRTNQ99748 197 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 SPATA5L1Q9BVQ7 753 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 TWSG1Q9GZX9 223 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 DUSP21Q9H596 190 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 ZNF556Q9HAH1 456 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PRDM9Q9NQV7 894 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 RXFP3Q9NSD7 469 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 KLF15Q9UIH9 416 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 CDC14AQ9UNH5 594 aa9.41□□□□□ -0.9
VPS25-202ENST00000589219 PI4KAP42356 2102 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ACACBO00763 2458 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TRPM6Q9BX84 2022 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PRAMEF33A0A0G2JMD5 474 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 A6NCN8 305 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ISM1B1AKI9 464 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 HMGN4O00479 90 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ZW10O43264 779 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 B4GAT1O43505 415 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 RGS10O43665 173 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SLC28A2O43868 658 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PRAMEF10O60809 474 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 FAM20BO75063 409 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SERPINB7O75635 380 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 GADD45GO95257 159 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ADAP00813 363 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TFPTP0C1Z6 253 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 F3P13726 295 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 NDUFV2P19404 249 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 CCNA2P20248 432 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 POLR2IP36954 125 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 ACTR1BP42025 376 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 DHPSP49366 369 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 NCBP2P52298 156 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS25-202ENST00000589219 SMIM11AP58511 58 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ACTR1AP61163 376 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SLC35A2P78381 396 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 HYAL2Q12891 473 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TP53BP2Q13625 1128 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TCEAL6Q6IPX3 200 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TNFAIP8L2Q6P589 184 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 SLC36A4Q6YBV0 504 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PRSS48Q7RTY5 328 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ASPGQ86U10 573 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 NRROSQ86YC3 692 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 P3H2Q8IVL5 708 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SAMD14Q8IZD0 417 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 TAGAPQ8N103 731 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ACOT4Q8N9L9 421 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 MIPOL1Q8TD10 442 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PHF10Q8WUB8 498 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 SLC38A5Q8WUX1 472 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 APOBEC4Q8WW27 367 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 HMGB4Q8WW32 186 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 FCGR1BQ92637 280 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TCEAL3Q969E4 200 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 DHRS1Q96LJ7 313 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 MAPKAP1Q9BPZ7 522 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 BTBD2Q9BX70 525 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 AICDAQ9GZX7 198 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 LHPPQ9H008 270 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ABCG4Q9H172 646 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SRMSQ9H3Y6 488 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 GLIPR2Q9H4G4 154 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 GPN2Q9H9Y4 310 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 BCL2L10Q9HD36 194 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TMEM9BQ9NQ34 198 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PRDM7Q9NQW5 492 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ZCCHC3Q9NUD5 404 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 DNAAF2Q9NVR5 837 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 SPHK1Q9NYA1 384 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
VPS25-202ENST00000589219 TBC1D29Q9UFV1 150 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 PHF11Q9UIL8 331 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 ASB4Q9Y574 426 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 DGKBQ9Y6T7 804 aa9.4□□□□□ -0.9
VPS25-202ENST00000589219 TCRBV21S2A2A0A5A6 115 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 LNP1A1A4G5 178 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 OR2A25A4D2G3 310 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 POM121BA6NF01 834 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 URADA6NGE7 173 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 C4orf47A7E2U8 309 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 ZNF99A8MXY4 864 aaPredicted RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 C10orf142B7Z368 130 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 FAAHO00519 579 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 ASNA1O43681 348 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 MPZL2O60487 215 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 MFN2O95140 757 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 AIFM1O95831 613 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 FHP07954 510 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 SLC35G6P0C7Q6 338 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 NR2F6P10588 404 aa9.39□□□□□ -0.91
VPS25-202ENST00000589219 CSNK2A2P19784 350 aaPredicted RBP9.39□□□□□ -0.91
VPS25-202ENST00000589219 TNFRSF1BP20333 461 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms