RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 MTPNP58546 118 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 YBX1P67809 324 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 MRPS22P82650 360 aaKnown RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 MS4A2Q01362 244 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 RELAQ04206 551 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 KLC1Q07866 573 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 SLC9A5Q14940 896 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 MUM1Q2TAK8 710 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 RUNDC3AQ59EK9 446 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 MTX3Q5HYI7 312 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 TOR1AIP1Q5JTV8 583 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 LRIF1Q5T3J3 769 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ZNF425Q6IV72 752 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 SPESP1Q6UW49 350 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 LRRC74BQ6ZQY2 392 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ASPGQ86U10 573 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 ANKRD46Q86W74 232 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 BPHLQ86WA6 291 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 PAQR7Q86WK9 346 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 SLC38A9Q8NBW4 561 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 CAMKVQ8NCB2 501 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 OR2T12Q8NG77 320 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 OR2L5Q8NG80 312 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 PNPLA2Q96AD5 504 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 COQ8BQ96D53 544 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 NSMCE2Q96MF7 247 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 CCDC115Q96NT0 180 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 FCRL4Q96PJ5 515 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 OR2A14Q96R47 310 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 NRTNQ99748 197 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 SLC7A5P2Q9GIP4 190 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 PCDHAC1Q9H158 963 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 RAD21L1Q9H4I0 556 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 SOHLH2Q9NX45 425 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 C6orf203Q9P0P8 240 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 SLAMF8Q9P0V8 285 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 NKX1-2Q9UD57 310 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
SS18-207ENST00000577636 RP1L1Q8IWN7 2480 aaPredicted RBP9.57□□□□□ -0.88
SS18-207ENST00000577636 SHANK1Q9Y566 2161 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 LRIT2A6NDA9 550 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 OR5K3A6NET4 321 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 WIPF3A6NGB9 483 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 MEN1O00255 615 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ARPC2O15144 300 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 LCMT2O60294 686 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 GPIP06744 558 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ZCCHC18P0CG32 403 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 UMPSP11172 480 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 LAMP1P11279 417 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 DDCP20711 480 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 MAGP20916 626 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 TPP2P29144 1249 aaPredicted RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 OTX2P32243 289 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 GCKP35557 465 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 BSGP35613 385 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 PTDSS1P48651 473 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 ALDH9A1P49189 494 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 HSD11B2P80365 405 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 PDE7AQ13946 482 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ZIC1Q15915 447 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 CYP51A1Q16850 503 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 TMTC4Q5T4D3 741 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 FAM71E1Q6IPT2 247 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 LCN8Q6JVE9 175 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ERICH5Q6P6B1 374 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 FIGLAQ6QHK4 219 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 MED25Q71SY5 747 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 ABHD13Q7L211 337 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 TICAM1Q8IUC6 712 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 OR4A15Q8NGL6 344 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 CREB3L4Q8TEY5 395 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 C17orf62Q9BQA9 187 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 PAIP1Q9H074 479 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 RAB33BQ9H082 229 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 VCXQ9H320 206 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 DDX31Q9H8H2 851 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 LYARQ9NX58 379 aaKnown RBP9.56□□□□□ -0.88
SS18-207ENST00000577636 VAPAQ9P0L0 249 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 EGFL7Q9UHF1 273 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 TCFL5Q9UL49 500 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 AP4S1Q9Y587 144 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 PCDHB14Q9Y5E9 798 aa9.56□□□□□ -0.88
SS18-207ENST00000577636 A0A1W2PRB8 838 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ELOVL7A1L3X0 281 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 OR2A25A4D2G3 310 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 CLIC1O00299 241 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 TXNDC9O14530 226 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PDPK1O15530 556 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 TBX19O60806 448 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 CEACAM4O75871 244 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms