RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 GFPT1Q06210 699 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 SLC1A5Q15758 541 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 GPAT3Q53EU6 434 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 VWA2Q5GFL6 755 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF774Q6NX45 483 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 CCBE1Q6UXH8 406 aaPredicted RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 CEACAM19Q7Z692 300 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ADGRD2Q7Z7M1 963 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ADAMTSL2Q86TH1 951 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 LRRC49Q8IUZ0 686 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 PEX5LQ8IYB4 626 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 CHCHD4Q8N4Q1 142 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 SAMD12Q8N8I0 201 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 URGCPQ8TCY9 931 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 EEF2KMTQ96G04 330 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 RPGRIP1Q96KN7 1286 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ANKRD27Q96NW4 1050 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 TTYH2Q9BSA4 534 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 TRPV6Q9H1D0 765 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 IL1RL2Q9HB29 575 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 CLEC5AQ9NY25 188 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 FETUBQ9UGM5 382 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 MRPL11Q9Y3B7 192 aaKnown RBP3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 ZMYM6O95789 1325 aa3.7□□□□□ -1.82
SHCBP1-206ENST00000567698 TP53BP1Q12888 1972 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 RAD54L2Q9Y4B4 1467 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 A0A087WWV3 80 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 TRBV2A0A0J9YWF9 115 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 A0A0U1RRA0 63 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 SLC9B1P1A6NJY1 282 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 RNF212BA8MTL3 300 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 NME2P1O60361 137 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 BCAS2O75934 225 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 CXCL10P02778 98 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 FERP16591 822 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 PTGER3P43115 390 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 HNRNPFP52597 415 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 NLRP11P59045 1033 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 SRP54P61011 504 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 CCZ1BP86790 482 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 CCZ1P86791 482 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 CBX3Q13185 183 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF239Q16600 458 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 ANKRD55Q3KP44 614 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 EIPR1Q53HC9 387 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 HERC4Q5GLZ8 1057 aaPredicted RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 ARMCX5Q6P1M9 558 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 TOM1L2Q6ZVM7 507 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 TMUB2Q71RG4 321 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 SUMF1Q8NBK3 374 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 OR6T1Q8NGN1 323 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 C16orf58Q96GQ5 468 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 RANBP9Q96S59 729 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 RPP25Q9BUL9 199 aaKnown RBP3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 MGAT4AQ9UM21 535 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 SLC6A5Q9Y345 797 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 KNSTRNQ9Y448 316 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 AGRNO00468 2067 aa3.69□□□□□ -1.82
SHCBP1-206ENST00000567698 TMEM89A2RUT3 159 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 CHEK1O14757 476 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 BAG2O95816 211 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 MT-ND3P03897 115 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 FAM200BP0CF97 657 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 AHCYP23526 432 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 ELK3P41970 407 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 CASP9P55211 416 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 STARD6P59095 220 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 GALK2Q01415 458 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 EMC2Q15006 297 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 LTB4RQ15722 352 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 HAGHQ16775 308 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 C15orf32Q32M92 178 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 FAM43BQ6ZT52 329 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 LINC00518Q8N0U6 118 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 EXOC6Q8TAG9 804 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 RDH11Q8TC12 318 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 MGARPQ8TDB4 240 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 ATP6V0A1Q93050 837 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 NAP1L3Q99457 506 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 SIRPDQ9H106 197 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 RCOR3Q9P2K3 495 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 TUBGCP4Q9UGJ1 667 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 IKZF3Q9UKT9 509 aa3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 RPH3AQ9Y2J0 694 aaPredicted RBP3.68□□□□□ -1.82
SHCBP1-206ENST00000567698 EEF2KO00418 725 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ARPC1BO15143 372 aaKnown RBP3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF253O75346 499 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 FCGR3AP08637 254 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ZCCHC18P0CG32 403 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 MARCKSP29966 332 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ACADSBP45954 432 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ZNF131P52739 623 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ZKSCAN8Q15776 578 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 CLPPQ16740 277 aaPredicted RBP3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 HKDC1Q2TB90 917 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ADAMTSL5Q6ZMM2 481 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 BNIPLQ7Z465 357 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 MARCH9Q86YJ5 346 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 HPS6Q86YV9 775 aa3.67□□□□□ -1.82
SHCBP1-206ENST00000567698 ICA1LQ8NDH6 482 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms