RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RNF111Q6ZNA4 994 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 FRMD7Q6ZUT3 714 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 PAGE2Q7Z2X7 111 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 COMMD6Q7Z4G1 85 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 SIAH3Q8IW03 269 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 ST13P4Q8IZP2 240 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 MMP21Q8N119 569 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 GHDCQ8N2G8 530 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 RIT1Q92963 219 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 RELTQ969Z4 430 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 CCDC120Q96HB5 630 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 ART5Q96L15 291 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 DEFB127Q9H1M4 99 aa12.62□□□□□ -0.39
VPS9D1-204ENST00000565023 NINQ8N4C6 2090 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 ZNF407Q9C0G0 2248 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 PRSS44E7EML9 344 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 MANBAO00462 879 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 CDK2AP1O14519 115 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 ERAL1O75616 437 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 LRATO95237 230 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 CHN1P15882 459 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 NT5EP21589 574 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 SSTR4P31391 388 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 DNASE1L1P49184 302 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 ALDH9A1P49189 494 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 HTR6P50406 440 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 NR0B1P51843 470 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 BTKQ06187 659 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 CFAP157Q5JU67 520 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 NDUFAF5Q5TEU4 345 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 FAM180BQ6P0A1 224 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 FAM47EQ6ZV65 393 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 SPPL2CQ8IUH8 684 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 METTL4Q8N3J2 472 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 C1orf52Q8N6N3 182 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 OR4K14Q8NGD5 310 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 METTL6Q8TCB7 284 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 FBXL20Q96IG2 436 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 KCNA7Q96RP8 456 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 GATA5Q9BWX5 397 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 TIMM22Q9Y584 194 aa12.61□□□□□ -0.39
VPS9D1-204ENST00000565023 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 A0A1B0GTH9 108 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 TM9SF1O15321 606 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 KRT6AP02538 564 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 KRT6BP04259 564 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 IGKV3-11P04433 115 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 P04436 131 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 ENO1P06733 434 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 TPOP07202 933 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 BPGMP07738 259 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 CT62P0C5K7 136 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 CCL3P10147 92 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 DCTP40126 519 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 KRT6CP48668 564 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 XKP51811 444 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 PPIAP62937 165 aaKnown RBP12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 GALNT1Q10472 559 aaPredicted RBP12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 BIKQ13323 160 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 MPP2Q14168 576 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 C6orf163Q5TEZ5 329 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 PRAMEF20Q5VT98 475 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 OPN5Q6U736 354 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 TMEM64Q6YI46 380 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 MRGPRGQ86SM5 289 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 GPALPP1Q8IXQ4 340 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 POGLUT1Q8NBL1 392 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 FAM13CQ8NE31 585 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 C7orf57Q8NEG2 295 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 OR2M7Q8NG81 312 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 OR5M3Q8NGP4 307 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 OR8K3Q8NH51 312 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 TRMOQ9BU70 441 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 MECRQ9BV79 373 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 BRINP2Q9C0B6 783 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 BRF2Q9HAW0 419 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 PFDN4Q9NQP4 134 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 SACM1LQ9NTJ5 587 aa12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS9D1-204ENST00000565023 NCKAP5O14513 1909 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 GOLGA6L10A6NI86 522 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ACOT7O00154 380 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ULK1O75385 1050 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 ZWINTO95229 277 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 DHRS4L1P0CG22 281 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 SLC35E2P0CK97 266 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 HSD3B1P14060 373 aa12.59□□□□□ -0.39
VPS9D1-204ENST00000565023 HSD3B2P26439 372 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms