RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ZADH2Q8N4Q0 377 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 TEX19Q8NA77 164 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 PIWIL2Q8TC59 973 aaKnown RBP18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 HAS2Q92819 552 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 REEP4Q9H6H4 257 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 WDR55Q9H6Y2 383 aaPredicted RBP18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 LIN28AQ9H9Z2 209 aaKnown RBP18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 MED4Q9NPJ6 270 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 MIEF1Q9NQG6 463 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 TEKT2Q9UIF3 430 aa18.86■□□□□ 0.61
TSPAN3-207ENST00000559494 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 GABRR3A8MPY1 467 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 MYO1GB0I1T2 1018 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 TBX19O60806 448 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 VPS4BO75351 444 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 F10P00742 488 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 CLPSP04118 112 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 SSTR4P31391 388 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 ASMTP46597 345 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 RNF4P78317 190 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 FUT7Q11130 342 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 MAP4K2Q12851 820 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 LTB4RQ15722 352 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 ANKRD26P1Q6NSI1 321 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 C16orf47Q6ZP98 133 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 GALNT12Q8IXK2 581 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 SAMD14Q8IZD0 417 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 LGI4Q8N135 537 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 BEST3Q8N1M1 668 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 LRRC25Q8N386 305 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 CATSPER1Q8NEC5 780 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 ADCY4Q8NFM4 1077 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 SUN3Q8TAQ9 357 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 TM9SF4Q92544 642 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 ART5Q96L15 291 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 ASIC5Q9NY37 505 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 MAT2BQ9NZL9 334 aa18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 EIF3LQ9Y262 564 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-207ENST00000559494 NUP214P35658 2090 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 TRPC5OSA6NMA1 111 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 G6PDP11413 515 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 LBPP18428 481 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 DIO3P55073 304 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 SLC37A1P57057 533 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 MAD2L1Q13257 205 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 PDE7AQ13946 482 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 PTGR1Q14914 329 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 MPEG1Q2M385 716 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 PLEKHN1Q494U1 663 aaPredicted RBP18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF385BQ569K4 471 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 OR8K3Q8NH51 312 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 NUDT8Q8WV74 236 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 CTHRC1Q96CG8 243 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 BBS4Q96RK4 519 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 GIMAP4Q9NUV9 329 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 NOP53Q9NZM5 478 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 COPS7AQ9UBW8 275 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF639Q9UID6 485 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 ENTPD4Q9Y227 616 aa18.84■□□□□ 0.61
TSPAN3-207ENST00000559494 GOLGA8QA0A0J9YX86 632 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 GOLGA8OA6NCC3 632 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 GOLGA8NF8WBI6 632 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 EPHA3P29320 983 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 MPIP34949 423 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 SLC9B1Q4ZJI4 515 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 TRMT12Q53H54 448 aaKnown RBP18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 SLC6A19Q695T7 634 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 RGS9BPQ6ZS82 235 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 Q6ZS92 163 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 C9orf40Q8IXQ3 194 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 LRRC34Q8IZ02 419 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF615Q8N8J6 731 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 SIMC1Q8NDZ2 872 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 ZNF764Q96H86 408 aaPredicted RBP18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 BRINP2Q9C0B6 783 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 RNF32Q9H0A6 362 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 SLAMF7Q9NQ25 335 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 SH3BP4Q9P0V3 963 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 ATP6V1HQ9UI12 483 aa18.83■□□□□ 0.61
TSPAN3-207ENST00000559494 PRRC2CQ9Y520 2896 aaKnown RBP18.83■□□□□ 0.6
TSPAN3-207ENST00000559494 DYTNA2CJ06 578 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 PCSK2P16519 638 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 CD96P40200 585 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 ARG2P78540 354 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 MRPS35P82673 323 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF628Q5EBL2 1059 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF468Q5VIY5 522 aaPredicted RBP18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 OGFOD2Q6N063 350 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 RNF111Q6ZNA4 994 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 FAM47EQ6ZV65 393 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 RIMKLAQ8IXN7 391 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 VWA5B2Q8N398 1253 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 ARFGAP2Q8N6H7 521 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 KRTCAP2Q8N6L1 136 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 OR7A2PQ8NGA2 310 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 OR9A2Q8NGT5 310 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 KAT2AQ92830 837 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 PPCDCQ96CD2 204 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 MTERF3Q96E29 417 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms