RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GRHL2Q6ISB3 625 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 YRDCQ86U90 279 aaKnown RBP12.89□□□□□ -0.35
SLIRP-210ENST00000557431 KRTAP1-3Q8IUG1 177 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 ST13P4Q8IZP2 240 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-210ENST00000557431 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 RIT1Q92963 219 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 RGMAQ96B86 450 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 TSPAN17Q96FV3 270 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 UBXN10Q96LJ8 280 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 ATOH8Q96SQ7 321 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 TEX10Q9NXF1 929 aaPredicted RBP12.89□□□□□ -0.35
SLIRP-210ENST00000557431 NUDT4Q9NZJ9 180 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 CNIH4Q9P003 139 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
SLIRP-210ENST00000557431 RAI1Q7Z5J4 1906 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-210ENST00000557431 C2orf92A0A1B0GVN3 265 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 TCRBV9S1A1TA0A576 114 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 K7EPI3 171 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 PGRMC2O15173 223 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 DYRK3O43781 588 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 GPR75O95800 540 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 IL2RAP01589 272 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 BMP7P18075 431 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 BSGP35613 385 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 MASP1P48740 699 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 CDK9P50750 372 aaKnown RBP12.88□□□□□ -0.35
SLIRP-210ENST00000557431 NEK2P51955 445 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 RAB10P61026 200 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 FOXF2Q12947 444 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 SLMAPQ14BN4 828 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 RPS6KA2Q15349 733 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 SPRED3Q2MJR0 410 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 MRM1Q6IN84 353 aaKnown RBP12.88□□□□□ -0.35
SLIRP-210ENST00000557431 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
SLIRP-210ENST00000557431 RAPH1Q70E73 1250 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 LACC1Q8IV20 430 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 SLC15A4Q8N697 577 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 ZNF441Q8N8Z8 693 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 C9orf106Q8NAJ2 232 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 SPPL2AQ8TCT8 520 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 PYROXD1Q8WU10 500 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 WDYHV1Q96HA8 205 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 CPNE1Q99829 537 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 PLEKHF2Q9H8W4 249 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 QPCTLQ9NXS2 382 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 TXNDC16Q9P2K2 825 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 MTRF1LQ9UGC7 380 aaKnown RBP12.88□□□□□ -0.35
SLIRP-210ENST00000557431 PHF11Q9UIL8 331 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 ASB4Q9Y574 426 aa12.88□□□□□ -0.35
SLIRP-210ENST00000557431 NIPBLQ6KC79 2804 aaeCLIP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 A0A0A6YYD5 115 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 AHRRA9YTQ3 701 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 SLC35E2BP0CK96 405 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 NR2F6P10588 404 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 EPXP11678 715 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 TIMP3P35625 211 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 GP5P40197 560 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 GPX6P59796 221 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 CDKL4Q5MAI5 379 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 VASNQ6EMK4 673 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 MAATS1Q7Z4T9 603 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 LUZP2Q86TE4 346 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 ZCCHC7Q8N3Z6 543 aaKnown RBP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 PPM1NQ8N819 430 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 SIMC1Q8NDZ2 872 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 RDH11Q8TC12 318 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 KCTD4Q8WVF5 259 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 TANKQ92844 425 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 UBE2E3Q969T4 207 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 MBD6Q96DN6 1003 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 MRRFQ96E11 262 aaKnown RBP12.87□□□□□ -0.35
SLIRP-210ENST00000557431 UBQLN3Q9H347 655 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 EHD3Q9NZN3 535 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
SLIRP-210ENST00000557431 FAM159BA6NKW6 160 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 CLCA1A8K7I4 914 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 HPNP05981 417 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 FAM58BPP0C7Q3 252 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 MTHFD2P13995 350 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 EPB42P16452 691 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
SLIRP-210ENST00000557431 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-210ENST00000557431 NAGLUP54802 743 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 DCAF7P61962 342 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 SRYQ05066 204 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 CPSF6Q16630 551 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms