RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GYPCP04921 128 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 CD3EP07766 207 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 CD8BP10966 210 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 COX7A2P14406 83 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 COMPP49747 757 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-220ENST00000557037 COPS2P61201 443 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 NRF1Q16656 503 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 CR1LQ2VPA4 569 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF672Q499Z4 452 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-220ENST00000557037 STAC2Q6ZMT1 411 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 RBM43Q6ZSC3 357 aaKnown RBP11.25□□□□□ -0.61
PSEN1-220ENST00000557037 CENPUQ71F23 418 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 CHMP1BQ7LBR1 199 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 TAGAPQ8N103 731 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 KBTBD8Q8NFY9 601 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 MS4A6EQ96DS6 147 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 C11orf24Q96F05 449 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-220ENST00000557037 TMEM41AQ96HV5 264 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 TCF12Q99081 682 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 AIF1LQ9BQI0 150 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 ACTR6Q9GZN1 396 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 PARVBQ9HBI1 364 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 RNF112Q9ULX5 631 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
PSEN1-220ENST00000557037 IQANK1A0A1B0GTG1 560 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF189O75820 626 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 CCDC166P0CW27 439 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF708P17019 499 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 SRP14P37108 136 aaKnown RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 GFRA1P56159 465 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 HERVK_113P63132 956 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ERVK-8P63133 956 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 IRX1P78414 480 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 SETDB1Q15047 1291 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF549Q6P9A3 640 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 TMPRSS11BQ86T26 416 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ATG4DQ86TL0 474 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 IFNEQ86WN2 208 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 GPSM1Q86YR5 675 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 PRR22Q8IZ63 422 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 CD200R1Q8TD46 325 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 FAM168AQ92567 244 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 TP53INP1Q96A56 240 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 MFSD3Q96ES6 412 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ADAD1Q96M93 576 aaKnown RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 DGAT2Q96PD7 388 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 TACO1Q9BSH4 297 aaKnown RBP11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ERVK-6Q9BXR3 956 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 OR2B2Q9GZK3 357 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 MOCS1Q9NZB8 636 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 WWOXQ9NZC7 414 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 KLHL42Q9P2K6 505 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 ERVK-19Q9WJR5 959 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 EFR3BQ9Y2G0 817 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 DHRS7Q9Y394 339 aa11.24□□□□□ -0.61
PSEN1-220ENST00000557037 A0A088AWK7 358 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 LRIT2A6NDA9 550 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 CAPN14A8MX76 684 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 CDC7O00311 574 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 TJP3O95049 919 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 TGFAP01135 160 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-220ENST00000557037 STT3AP46977 705 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 DHX9Q08211 1270 aaKnown RBP11.23□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF844Q08AG5 666 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 RCN2Q14257 317 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 ZNF267Q14586 743 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-220ENST00000557037 TCEAL1Q15170 157 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 DUPD1Q68J44 220 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 UGT3A1Q6NUS8 523 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 NXPE4Q6UWF7 544 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 RNF111Q6ZNA4 994 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 PRUNE1Q86TP1 453 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 PALM2Q8IXS6 379 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 UBQLNLQ8IYU4 475 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 C10orf105Q8TEF2 133 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 FBXL20Q96IG2 436 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 SFXN2Q96NB2 322 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 SERINC2Q96SA4 455 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 CACNG6Q9BXT2 260 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 METTL7AQ9H8H3 244 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 PELI2Q9HAT8 420 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSEN1-220ENST00000557037 TAS2R10Q9NYW0 307 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 DYRK1BQ9Y463 629 aa11.23□□□□□ -0.61
PSEN1-220ENST00000557037 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
PSEN1-220ENST00000557037 TMEM89A2RUT3 159 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 BTNL10A8MVZ5 291 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 TMPRSS2O15393 492 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 DYRK3O43781 588 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 FGF17O60258 216 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 RGS9O75916 674 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 C8GP07360 202 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 OGNP20774 298 aaKnown RBP11.22□□□□□ -0.61
PSEN1-220ENST00000557037 PTPN7P35236 360 aa11.22□□□□□ -0.61
PSEN1-220ENST00000557037 PCDH1Q08174 1060 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms