RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 TANKQ92844 425 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 RILPQ96NA2 401 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 GNRHR2Q96P88 292 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 TRIB1Q96RU8 372 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 ATOH8Q96SQ7 321 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
CHD8-211ENST00000556833 CXXC4Q9H2H0 198 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 ACTR8Q9H981 624 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 TEX10Q9NXF1 929 aaPredicted RBP13.55□□□□□ -0.24
CHD8-211ENST00000556833 SAR1BQ9Y6B6 198 aa13.55□□□□□ -0.24
CHD8-211ENST00000556833 C2orf72A6NCS6 295 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 PGRMC2O15173 223 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 KERAO60938 352 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 GPR75O95800 540 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 LTA4HP09960 611 aaKnown RBP13.54□□□□□ -0.24
CHD8-211ENST00000556833 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 GFAPP14136 432 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 SPRP35270 261 aaPredicted RBP13.54□□□□□ -0.24
CHD8-211ENST00000556833 PAFAH1B1P43034 410 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 ZNF136P52737 540 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 CALCOCO2Q13137 446 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 NTRK2Q16620 822 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 PFKFB4Q16877 469 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 WIPI1Q5MNZ9 446 aaPredicted RBP13.54□□□□□ -0.24
CHD8-211ENST00000556833 SLC15A4Q8N697 577 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 UBTD2Q8WUN7 234 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 NINJ1Q92982 152 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 RNASE6Q93091 150 aaKnown RBP13.54□□□□□ -0.24
CHD8-211ENST00000556833 SMR3AQ99954 134 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 CENPKQ9BS16 269 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 ZNF717Q9BY31 904 aaPredicted RBP13.54□□□□□ -0.24
CHD8-211ENST00000556833 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHD8-211ENST00000556833 MS4A12Q9NXJ0 267 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 CNIH4Q9P003 139 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 ASB4Q9Y574 426 aa13.54□□□□□ -0.24
CHD8-211ENST00000556833 A0A0A6YYD5 115 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 C2orf92A0A1B0GVN3 265 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 CCDC188H7C350 402 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 SYT5O00445 386 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 TRIM3O75382 744 aaPredicted RBP13.53□□□□□ -0.24
CHD8-211ENST00000556833 C1QAP02745 245 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 BSGP35613 385 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 SPRED3Q2MJR0 410 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 TAGAPQ8N103 731 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 VWA5B2Q8N398 1253 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 ZCCHC7Q8N3Z6 543 aaKnown RBP13.53□□□□□ -0.24
CHD8-211ENST00000556833 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 CDK15Q96Q40 435 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 TIMP4Q99727 224 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 ACKR4Q9NPB9 350 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
CHD8-211ENST00000556833 DTX4Q9Y2E6 619 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 RNF11Q9Y3C5 154 aa13.53□□□□□ -0.24
CHD8-211ENST00000556833 TUBAL3A6NHL2 446 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 TP53I11O14683 189 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 RAD51CO43502 376 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 SIX3O95343 332 aaPredicted RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 EPPINO95925 133 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 IL2RAP01589 272 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 MTHFD2P13995 350 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 NT5EP21589 574 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 TCEA1P23193 301 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 SERPINB1P30740 379 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 CEACAM8P31997 349 aaPredicted RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 CDK9P50750 372 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 ADAM8P78325 824 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 PHEXP78562 749 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 E2F2Q14209 437 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 UAP1Q16222 522 aaPredicted RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 KRTAP21-3Q3LHN1 58 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 GRTP1Q5TC63 336 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 POMZP3Q6PJE2 187 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 PAMR1Q6UXH9 720 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 GOLGA7Q7Z5G4 137 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 YRDCQ86U90 279 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 LACC1Q8IV20 430 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 CENPLQ8N0S6 344 aaPredicted RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 WFDC11Q8NEX6 87 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 RDH11Q8TC12 318 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 SPPL2AQ8TCT8 520 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 FAM222BQ8WU58 562 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 UGT2B28Q9BY64 529 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 WDR41Q9HAD4 459 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 LYARQ9NX58 379 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 QPCTLQ9NXS2 382 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 MTRF1LQ9UGC7 380 aaKnown RBP13.52□□□□□ -0.25
CHD8-211ENST00000556833 NPFFR2Q9Y5X5 522 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 MED12LQ86YW9 2145 aa13.52□□□□□ -0.25
CHD8-211ENST00000556833 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 DRD2P14416 443 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 BMP7P18075 431 aa13.51□□□□□ -0.25
CHD8-211ENST00000556833 PIK3R1P27986 724 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms