RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CES1P1Q9UKY3 287 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 CFL2Q9Y281 166 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 TIMM22Q9Y584 194 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 ZNF780BQ9Y6R6 833 aa21.51■■□□□ 1.03
CHFR-222ENST00000544093 MYO7BQ6PIF6 2116 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 C2orf92A0A1B0GVN3 265 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 GNG14A0A1W2PPG7 69 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 PCDH7O60245 1069 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 P04436 131 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 CNR1P21554 472 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 SERPINB3P29508 390 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 GPR85P60893 370 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 HEPACAMQ14CZ8 416 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 RNFT1Q5M7Z0 435 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 HLA-DQA1Q5Y7H0 255 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 PAOXQ6QHF9 649 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 EID3Q8N140 333 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 C17orf47Q8NEP4 570 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 OR2M7Q8NG81 312 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 KLHL29Q96CT2 875 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 SPACA9Q96E40 222 aaPredicted RBP21.5■■□□□ 1.03
CHFR-222ENST00000544093 TRMOQ9BU70 441 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 GTF3C1Q12789 2109 aa21.5■■□□□ 1.03
CHFR-222ENST00000544093 CAPN14A8MX76 684 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 CCL21O00585 134 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 UBFD1O14562 309 aaKnown RBP21.49■■□□□ 1.03
CHFR-222ENST00000544093 ERAL1O75616 437 aaKnown RBP21.49■■□□□ 1.03
CHFR-222ENST00000544093 ABOP16442 354 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 NT5EP21589 574 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 TIA1P31483 386 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHFR-222ENST00000544093 HTR6P50406 440 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 IMPG1Q17R60 797 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 ZNF791Q3KP31 576 aaPredicted RBP21.49■■□□□ 1.03
CHFR-222ENST00000544093 TRABD2AQ86V40 505 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 SLC22A16Q86VW1 577 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 VWA5B2Q8N398 1253 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 OR2W6PQ8NHA6 318 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 SREK1Q8WXA9 508 aaKnown RBP21.49■■□□□ 1.03
CHFR-222ENST00000544093 METTL2AQ96IZ6 378 aaKnown RBP21.49■■□□□ 1.03
CHFR-222ENST00000544093 KCNA7Q96RP8 456 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 OR10A5Q9H207 317 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 PLLPQ9Y342 182 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 MAST4O15021 2626 aa21.49■■□□□ 1.03
CHFR-222ENST00000544093 A1L4Q6 167 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 NADKO95544 446 aaPredicted RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 CLPSP04118 112 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 TUBBP07437 444 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 FBXO45P0C2W1 286 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 UROSP10746 265 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 SSTR4P31391 388 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 ALDH9A1P49189 494 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 TMED10P49755 219 aaKnown RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 HMGCS1Q01581 520 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 PLGLB1Q02325 96 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 MAP4K2Q12851 820 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 ZNF750Q32MQ0 723 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 SLC22A10Q63ZE4 541 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 RPTNQ6XPR3 784 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 FAM47EQ6ZV65 393 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 TRIM46Q7Z4K8 759 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 LRRC25Q8N386 305 aaPredicted RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 MREGQ8N565 214 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 BANPQ8N9N5 519 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 FAM76AQ8TAV0 307 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 C11orf24Q96F05 449 aaPredicted RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 RRAGDQ9NQL2 400 aaPredicted RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 DEPPQ9NTK1 212 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 EHD3Q9NZN3 535 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 CNIH4Q9P003 139 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 UTS2RQ9UKP6 389 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 DLGAP4Q9Y2H0 992 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 WBP11Q9Y2W2 641 aaKnown RBP21.48■■□□□ 1.03
CHFR-222ENST00000544093 CROCCQ5TZA2 2017 aa21.48■■□□□ 1.03
CHFR-222ENST00000544093 PRRG2O14669 202 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ZNF354AO60765 605 aaPredicted RBP21.47■■□□□ 1.03
CHFR-222ENST00000544093 ZG16O60844 167 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 TRIM13O60858 407 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ESRRAP11474 423 aaPredicted RBP21.47■■□□□ 1.03
CHFR-222ENST00000544093 CHN1P15882 459 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 NRG3P56975 720 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 SPDYAQ5MJ70 313 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ARHGAP11AQ6P4F7 1023 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ZNF615Q8N8J6 731 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ZNF441Q8N8Z8 693 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 PAQR8Q8TEZ7 354 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 ERP27Q96DN0 273 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 APIPQ96GX9 242 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 IL1RL2Q9HB29 575 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 GIMAP4Q9NUV9 329 aa21.47■■□□□ 1.03
CHFR-222ENST00000544093 NAV2Q8IVL1 2488 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 A0A1W2PS29 197 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 ESPNB1AK53 854 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 HS6ST1O60243 411 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 RSL1D1O76021 490 aaKnown RBP21.46■■□□□ 1.03
CHFR-222ENST00000544093 WISP2O76076 250 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 FEN1P39748 380 aaKnown RBP21.46■■□□□ 1.03
CHFR-222ENST00000544093 RFC3P40938 356 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 FOXA1P55317 472 aa21.46■■□□□ 1.03
CHFR-222ENST00000544093 PPIAP62937 165 aaKnown RBP21.46■■□□□ 1.03
CHFR-222ENST00000544093 RAE1P78406 368 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms