RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 PRAMEF20Q5VT98 475 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 PAGE2Q7Z2X7 111 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 RELL1Q8IUW5 271 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 CCDC71Q8IV32 467 aaPredicted RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 CTAGE4Q8IX94 777 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 GALNT12Q8IXK2 581 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 LIX1Q8N485 282 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 RNF175Q8N4F7 328 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 ZNF441Q8N8Z8 693 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 NOA1Q8NC60 698 aaKnown RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 FAM13CQ8NE31 585 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 MNS1Q8NEH6 495 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 C17orf47Q8NEP4 570 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 OR10G3Q8NGC4 313 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 OR5M9Q8NGP3 310 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 NEIL3Q8TAT5 605 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 SREK1Q8WXA9 508 aaKnown RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 RIT1Q92963 219 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 TP53INP1Q96A56 240 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 GAL3ST4Q96RP7 486 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 ZNF559Q9BR84 538 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 LRRC1Q9BTT6 524 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 FUT8Q9BYC5 575 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 TSPYL1Q9H0U9 437 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 ACSS3Q9H6R3 686 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 IPPKQ9H8X2 491 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 ZDHHC18Q9NUE0 388 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 CPSF2Q9P2I0 782 aaKnown RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 TNFRSF10DQ9UBN6 386 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 MTRF1LQ9UGC7 380 aaKnown RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 ITGB1BP2Q9UKP3 347 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 ACAD8Q9UKU7 415 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 CNOT11Q9UKZ1 510 aaKnown RBP7.96□□□□□ -1.14
DDB1-212ENST00000538470 IKBKGQ9Y6K9 419 aa7.96□□□□□ -1.14
DDB1-212ENST00000538470 AKAP6Q13023 2319 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 C2orf92A0A1B0GVN3 265 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 A0A1W2PR48 441 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 HMX2A2RU54 273 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 HSPB2A8KAH6 182 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 HRKO00198 91 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 EEDO75530 441 aaKnown RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 PRKRAO75569 313 aaKnown RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 CLPSP04118 112 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 INHBAP08476 426 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CELA3AP09093 270 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 RBP1P09455 135 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CD1EP15812 388 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CNTFP26441 200 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 PIK3R1P27986 724 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 TYK2P29597 1187 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 ARL1P40616 181 aaPredicted RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 MAGEA12P43365 314 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 SERPINB9P50453 376 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CCNG1P51959 295 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 NRG3P56975 720 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 KRTAP10-9P60411 292 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 MYBPHQ13203 477 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 TRADDQ15628 312 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 HSPB2Q16082 182 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 UAP1Q16222 522 aaPredicted RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 CES4AQ5XG92 561 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 HLA-DQA1Q5Y7H0 255 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 FRG2Q64ET8 278 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 RTL6Q6ICC9 239 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 DGAT2L6Q6ZPD8 337 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 TMEM200AQ86VY9 491 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 PM20D2Q8IYS1 436 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 PTGR2Q8N8N7 351 aaPredicted RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 OR7G1Q8NGA0 311 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 OR10Q1Q8NGQ4 319 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 PPWD1Q96BP3 646 aaKnown RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 LRRC46Q96FV0 321 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 GPR78Q96P69 363 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 FRG2BQ96QU4 278 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 DOHHQ9BU89 302 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 NTMT1Q9BV86 223 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 UCK2Q9BZX2 261 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CXorf21Q9HAI6 301 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 SEMA4BQ9NPR2 832 aaPredicted RBP7.95□□□□□ -1.14
DDB1-212ENST00000538470 AHSPQ9NZD4 102 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 NINJ2Q9NZG7 142 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 SPRR3Q9UBC9 169 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 PCTPQ9UKL6 214 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 CFL2Q9Y281 166 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 RNF11Q9Y3C5 154 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 L3MBTL1Q9Y468 752 aa7.95□□□□□ -1.14
DDB1-212ENST00000538470 SETD2Q9BYW2 2564 aaPredicted RBP7.94□□□□□ -1.14
DDB1-212ENST00000538470 A0A0G2JNJ9 132 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 LRRC14BA6NHZ5 514 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 GLOD5A6NK44 160 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 OR7A17O14581 309 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 SMIM24O75264 130 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 GUCY1B2O75343 617 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 TRIM3O75382 744 aaPredicted RBP7.94□□□□□ -1.14
DDB1-212ENST00000538470 SNX4O95219 450 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 ZWINTO95229 277 aa7.94□□□□□ -1.14
DDB1-212ENST00000538470 SIX3O95343 332 aaPredicted RBP7.94□□□□□ -1.14
DDB1-212ENST00000538470 RPS17P08708 135 aaKnown RBP7.94□□□□□ -1.14
DDB1-212ENST00000538470 RFPL3SP0C7P2 107 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms