RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 DEFB127Q9H1M4 99 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 VPS11Q9H270 941 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 NOL11Q9H8H0 719 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ACTR8Q9H981 624 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 IL1RL2Q9HB29 575 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 LYARQ9NX58 379 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 CPSF2Q9P2I0 782 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 COPS7AQ9UBW8 275 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 MTRF1LQ9UGC7 380 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 ZNF180Q9UJW8 692 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 PCTPQ9UKL6 214 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 TMCO1Q9UM00 188 aa9.28□□□□□ -0.92
CLSTN3-203ENST00000534830 OR14I1A6ND48 311 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PGRMC2O15173 223 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CDC40O60508 579 aaKnown RBP eCLIP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CTAG2O75638 210 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 ACSL3O95573 720 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TPOP07202 933 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 RPS17P08708 135 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC35E2P0CK97 266 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 COX7A2P14406 83 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CNTFP26441 200 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PCSK6P29122 969 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SERPINB9P50453 376 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CCNG1P51959 295 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PHEXP78562 749 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PLIN5Q00G26 463 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 GGTA1PQ4G0N0 100 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 GXYLT1Q4G148 440 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 C10orf62Q5T681 223 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TMEM211Q6ICI0 200 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PAOXQ6QHF9 649 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 GK5Q6ZS86 529 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TRILQ7L0X0 811 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC22A16Q86VW1 577 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 DND1Q8IYX4 353 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CLYBLQ8N0X4 340 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 RPRMLQ8N4K4 120 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TMEM251Q8N6I4 163 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 WFDC11Q8NEX6 87 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 MYRIPQ8NFW9 859 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 NTNG2Q96CW9 530 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 ART5Q96L15 291 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 FMO2Q99518 471 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SERPINI1Q99574 410 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 GPATCH1Q9BRR8 931 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 PELOQ9BRX2 385 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 C1QTNF3Q9BXJ4 246 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CLEC4MQ9H2X3 399 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TP63Q9H3D4 680 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SEMA4BQ9NPR2 832 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 SACM1LQ9NTJ5 587 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 TUBA8Q9NY65 449 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 XPR1Q9UBH6 696 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 ZNF225Q9UK10 706 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 ADAM29Q9UKF5 820 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 RNF6Q9Y252 685 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 LIPGQ9Y5X9 500 aa9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 CHCHD2Q9Y6H1 151 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-203ENST00000534830 A0A1W2PS29 197 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 GLOD5A6NK44 160 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 OR6C76A6NM76 312 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM166BA8MTA8 275 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 G3V3Y1 287 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ACOT7O00154 380 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 AQP7O14520 342 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 DYRK3O43781 588 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 SUSD5O60279 629 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 AIFM1O95831 613 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 P04436 131 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 HEXAP06865 529 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 INHBAP08476 426 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FBXO45P0C2W1 286 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 NR2F6P10588 404 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 S1PR1P21453 382 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 GCAP28676 217 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 MAGEA5P43359 124 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 DNASE1L1P49184 302 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 HERVK_113P63132 956 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ERVK-8P63133 956 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 PLGLB1Q02325 96 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FUT7Q11130 342 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 TBL3Q12788 808 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 EBPQ15125 230 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 NTRK2Q16620 822 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 TSNAXIP1Q2TAA8 658 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 SLC22A10Q63ZE4 541 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FRG2Q64ET8 278 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 RTL6Q6ICC9 239 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 CYP20A1Q6UW02 462 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 TIFABQ6ZNK6 161 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM47EQ6ZV65 393 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 NUDT13Q86X67 352 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 CCDC71Q8IV32 467 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 ZZZ3Q8IYH5 903 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 METTL4Q8N3J2 472 aa9.26□□□□□ -0.93
CLSTN3-203ENST00000534830 FAM109AQ8N4B1 249 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms