RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	OR4K14	Q8NGD5	310 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	SLC22A8	Q8TCC7	542 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	PAQR8	Q8TEZ7	354 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	SPACA9	Q96E40	222 aa	Predicted RBP	11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	TMEM237	Q96Q45	408 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	HBEGF	Q99075	208 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	ELOVL6	Q9H5J4	265 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	BRF2	Q9HAW0	419 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	IL1RL2	Q9HB29	575 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	CHST11	Q9NPF2	352 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	8e-10	■■□□□ 11.6
VEGFA-223	ENST00000523125	AHSP	Q9NZD4	102 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	FETUB	Q9UGM5	382 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	TRPS1	Q9UHF7	1281 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	SLC12A4	Q9UP95	1085 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	LIPG	Q9Y5X9	500 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125	OTOG	Q6ZRI0	2925 aa		11.41	□□□□□ -0.58
VEGFA-223	ENST00000523125		A0A1B0GVC2	190 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	FOXO6	A8MYZ6	492 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	GOLGA8R	I6L899	631 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	ACOT7	O00154	380 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	SUPT7L	O94864	414 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	CLDN14	O95500	239 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125		P04436	131 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	CELA3A	P09093	270 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	FBXO45	P0C2W1	286 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	IMPDH1	P20839	514 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	SOX18	P35713	384 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	KIR3DL1	P43629	444 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	XK	P51811	444 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	MAPK12	P53778	367 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	MGAT2	Q10469	447 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	SLC48A1	Q6P1K1	146 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	TRIL	Q7L0X0	811 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	PAGE2	Q7Z2X7	111 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	MCEMP1	Q8IX19	187 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	GSPT2	Q8IYD1	628 aa	Known RBP	11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	RPRML	Q8N4K4	120 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	CDYL2	Q8N8U2	506 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	OR10G3	Q8NGC4	313 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	ACMSD	Q8TDX5	336 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	SELENOM	Q8WWX9	145 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	TM4SF18	Q96CE8	201 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	GAL3ST4	Q96RP7	486 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	ZNF382	Q96SR6	550 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	CNOT11	Q9UKZ1	510 aa	Known RBP	11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	SNX6	Q9UNH7	406 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	PCDHA9	Q9Y5H5	950 aa		11.4	□□□□□ -0.58
VEGFA-223	ENST00000523125	C2orf92	A0A1B0GVN3	265 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125		A0A1W2PPM1	405 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	MANBA	O00462	879 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	RFPL3S	P0C7P2	107 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	PYGB	P11216	843 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	CPM	P14384	443 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	CHN1	P15882	459 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	POR	P16435	677 aa	Predicted RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	TAC1	P20366	129 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	ATP5F1	P24539	256 aa	Predicted RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	PRKAA2	P54646	552 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	DUSP2	Q05923	314 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	NTRK2	Q16620	822 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	GXYLT1	Q4G148	440 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	PAOX	Q6QHF9	649 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	TMEM64	Q6YI46	380 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	SH2D5	Q6ZV89	423 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	GALNT12	Q8IXK2	581 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	DND1	Q8IYX4	353 aa	Known RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	INTS1	Q8N201	2190 aa	Known RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	FBXW8	Q8N3Y1	598 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	FAM109A	Q8N4B1	249 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	C1orf52	Q8N6N3	182 aa	Known RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	ACBD4	Q8NC06	268 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	FAM13C	Q8NE31	585 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	CHTF18	Q8WVB6	975 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	ADIPOR1	Q96A54	375 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	TP53INP1	Q96A56	240 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	L3HYPDH	Q96EM0	354 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	TP63	Q9H3D4	680 aa	Predicted RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	PNPLA3	Q9NST1	481 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	RYDEN	Q9NUL5	291 aa	Known RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	CNIH4	Q9P003	139 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	TBK1	Q9UHD2	729 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	EMCN	Q9ULC0	261 aa		11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.39	□□□□□ -0.59
VEGFA-223	ENST00000523125	ATP6AP2	A0A1C7CYW4	349 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	C1orf226	A1L170	272 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	OR14I1	A6ND48	311 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	LRRC3C	A6NJW4	275 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	NPIPA2	E9PIF3	369 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	NPIPA3	F8WFD2	350 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	SUSD5	O60279	629 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	ATP6AP2	O75787	350 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	LRAT	O95237	230 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	SHBG	P04278	402 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	GSTA1	P08263	222 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	SNRPB2	P08579	225 aa	Known RBP	11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	HSD3B1	P14060	373 aa		11.38	□□□□□ -0.59
VEGFA-223	ENST00000523125	HSD3B2	P26439	372 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms