RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 NEFHP12036 1026 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 CSNK2A2P19784 350 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-221ENST00000520265 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 HSF1Q00613 529 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 NNATQ16517 81 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 CEP85LQ5SZL2 805 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 ZCCHC23Q6ZST2 131 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 ZNF227Q86WZ6 799 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 DDIASQ8IXT1 998 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 VWA5B2Q8N398 1253 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 NUBPLQ8TB37 319 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 GPR137Q96N19 417 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-221ENST00000520265 WWTR1Q9GZV5 400 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 CXorf21Q9HAI6 301 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 MIEF1Q9NQG6 463 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 RRAGDQ9NQL2 400 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-221ENST00000520265 MKS1Q9NXB0 559 aa13.12□□□□□ -0.31
VEGFA-221ENST00000520265 A0A1B0GUH1 482 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ACOT7O00154 380 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 AZIN1O14977 448 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 RGS14O43566 566 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 HS6ST1O60243 411 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 LRATO95237 230 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 CT62P0C5K7 136 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ESRRAP11474 423 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 NR0B1P51843 470 aaKnown RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 SLC37A1P57057 533 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 TRA2BP62995 288 aaKnown RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ZNF844Q08AG5 666 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ZNF763Q0D2J5 394 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 EBPQ15125 230 aaKnown RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 LTB4RQ15722 352 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 PRAMEF20Q5VT98 475 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 GK5Q6ZS86 529 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ZGRF1Q86YA3 2104 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 TAGAPQ8N103 731 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 ARMC10Q8N2F6 343 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 MREGQ8N565 214 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 C16orf78Q8WTQ4 265 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 JSRP1Q96MG2 331 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 BBS4Q96RK4 519 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 EML4Q9HC35 981 aaKnown RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 SACM1LQ9NTJ5 587 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
VEGFA-221ENST00000520265 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
VEGFA-221ENST00000520265 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 A0A1W2PRS3 328 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 ASPDHA6ND91 283 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 SLC28A1O00337 649 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CCL21O00585 134 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 SLC19A2O60779 497 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 SEC22BO75396 215 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 PDE9AO76083 593 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 MYZAPP0CAP1 466 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 RNF224P0DH78 156 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CREB1P16220 341 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 DNASE1L1P49184 302 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 NRG3P56975 720 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 PPIAP62937 165 aaKnown RBP13.1□□□□□ -0.31
VEGFA-221ENST00000520265 KCNJ2P63252 427 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 RAE1P78406 368 aaKnown RBP13.1□□□□□ -0.31
VEGFA-221ENST00000520265 C2orf80Q0P641 193 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 EXOSC7Q15024 291 aaKnown RBP13.1□□□□□ -0.31
VEGFA-221ENST00000520265 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 PIGGQ5H8A4 983 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 SH2D4BQ5SQS7 431 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 TMEM64Q6YI46 380 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CCDC116Q8IYX3 515 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 PRR22Q8IZ63 422 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CLEC18CQ8NCF0 446 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 OR2M7Q8NG81 312 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-221ENST00000520265 TRMOQ9BU70 441 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 EXO5Q9H790 373 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
VEGFA-221ENST00000520265 CTIFO43310 598 aaKnown RBP13.09□□□□□ -0.31
VEGFA-221ENST00000520265 ASNA1O43681 348 aa13.09□□□□□ -0.31
VEGFA-221ENST00000520265 ZNF354AO60765 605 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms