RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZFAND1Q8TCF1 268 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 RFKQ969G6 155 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 COQ8BQ96D53 544 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 KLF16Q9BXK1 252 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-213ENST00000514442 TMEM168Q9H0V1 697 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 GORASP2Q9H8Y8 452 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 EXTL2Q9UBQ6 330 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 IRAK3Q9Y616 596 aa12.55□□□□□ -0.4
TCOF1-213ENST00000514442 TNFRSF10BO14763 440 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 CDK1P06493 297 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 RETP07949 1114 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 FOSL1P15407 271 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 AHCYP23526 432 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 RGS6P49758 472 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF763Q0D2J5 394 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ISCA2Q86U28 154 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 OR2M4Q96R27 311 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF334Q9HCZ1 680 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 FAM120CQ9NX05 1096 aaKnown RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 WASHC1A8K0Z3 465 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 UBXN7O94888 489 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 HTR3AP46098 478 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 SLC51BQ86UW2 128 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 GJD3Q8N144 294 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 PIGUQ9H490 435 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 RHCGQ9UBD6 479 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ABCD2Q9UBJ2 740 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 PRRC2BQ5JSZ5 2229 aaKnown RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 RAB36O95755 333 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 PAHP00439 452 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 SRPRAP08240 638 aaKnown RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 FGF4P08620 206 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 RCAN2Q14206 197 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 LASP1Q14847 261 aaKnown RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 SPHARQ15513 63 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF311Q5JNZ3 666 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 OAFQ86UD1 273 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ALG5Q9Y673 324 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ALDOCP09972 364 aaKnown RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 POU6F2P78424 691 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 KCNC3Q14003 757 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ZNF362Q5T0B9 420 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-213ENST00000514442 CES4AQ5XG92 561 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 AQP11Q8NBQ7 271 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 SNX33Q8WV41 574 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 ISL2Q96A47 359 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 TBX5Q99593 518 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 TMED9Q9BVK6 235 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 TMEM45AQ9NWC5 275 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 COPZ2Q9P299 210 aa12.54□□□□□ -0.4
TCOF1-213ENST00000514442 MN1Q10571 1320 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 FEZF1A0PJY2 475 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 DUXAA6NLW8 204 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 TOXO94900 526 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 ECDO95905 644 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 MPC1LP0DKB6 136 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 PSMA6P60900 246 aaKnown RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 CST6Q15828 149 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 BCL2L15Q5TBC7 163 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 CFAP77Q6ZQR2 320 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 FUBP1Q96AE4 644 aaKnown RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 GPR174Q9BXC1 333 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 SLC46A2Q9BY10 475 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 HRASLS2Q9NWW9 162 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 A0A096LPI6 279 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 KANTRA0A1W2PQU2 76 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 SPNP16150 400 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 RGRP47804 291 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 PHF19Q5T6S3 580 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 LINGO2Q7L985 606 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 OR10H4Q8NGA5 316 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 C3orf30Q96M34 536 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 TBC1D24Q9ULP9 559 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 AKAP8O43823 692 aaKnown RBP12.53□□□□□ -0.4
TCOF1-213ENST00000514442 GIMD1P0DJR0 217 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 C1GALT1C1LP0DN25 315 aa12.53□□□□□ -0.4
TCOF1-213ENST00000514442 DOC2AQ14183 400 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms