RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 HINT3Q9NQE9 182 aaKnown RBP3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ZNF302Q9NR11 478 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ACSS1Q9NUB1 689 aaPredicted RBP3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ACOXLQ9NUZ1 547 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 SMOXQ9NWM0 555 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 CLEC5AQ9NY25 188 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 IL37Q9NZH6 218 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 TXNDC16Q9P2K2 825 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC9A2Q9UBY0 812 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 NDRG3Q9UGV2 375 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ADAM28Q9UKQ2 775 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 POFUT2Q9Y2G5 429 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 CSDC2Q9Y534 153 aaKnown RBP3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 MAD1L1Q9Y6D9 718 aa3.96□□□□□ -1.78
SMARCA5-202ENST00000508573 ATXN2Q99700 1313 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CNTNAP2Q9UHC6 1331 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 C1orf232A0A0U1RR37 186 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CCDC162PA2VCL2 907 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 GOLGA8IPA6NC78 632 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TUBAL3A6NHL2 446 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TMEM210A6NLX4 147 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 WASHC1A8K0Z3 465 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 GOLGA8RI6L899 631 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 P2RY10O00398 339 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 LDB3O75112 727 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 STX11O75558 287 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CLDN7O95471 211 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TSPAN12O95859 305 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SFTPBP07988 381 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ERCC1P07992 297 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 F7P08709 466 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CD63P08962 238 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SMIM18P0DKX4 95 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 DBTP11182 482 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CYP11B1P15538 503 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 POLR2CP19387 275 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ACKR3P25106 362 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CD40LGP29965 261 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 HNRNPH3P31942 346 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 KCNJ4P48050 445 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CCT3P49368 545 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 THOP1P52888 689 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ZXDBP98169 803 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 PLOD1Q02809 727 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CDH17Q12864 832 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 GRIK2Q13002 908 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 FADDQ13158 208 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 GPS2Q13227 327 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ITGADQ13349 1161 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 NFATC2Q13469 925 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 VEZF1Q14119 521 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ITIH4Q14624 930 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 MICBQ29980 383 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ZNF528Q3MIS6 628 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 UGT3A2Q3SY77 523 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 C6orf226Q5I0X4 101 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 EOGTQ5NDL2 527 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 PXDC1Q5TGL8 231 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TMEM225Q6GV28 225 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 LCN10Q6JVE6 187 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TMIGD1Q6UXZ0 262 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 WASH2PQ6VEQ5 465 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 HSDL2Q6YN16 418 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 GPRIN3Q6ZVF9 776 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ZNF534Q76KX8 674 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 PATL1Q86TB9 770 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CYP4Z1Q86W10 505 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CNGA4Q8IV77 575 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 NAGSQ8N159 534 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 BMPERQ8N8U9 685 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 OR1L4Q8NGR5 311 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 M1APQ8TC57 530 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 MARCH1Q8TCQ1 289 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SLC44A1Q8WWI5 657 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 MAP4K1Q92918 833 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 LHX4Q969G2 390 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 COQ8BQ96D53 544 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ASB9Q96DX5 294 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CERS2Q96G23 380 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 PPP1R16AQ96I34 528 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TSNARE1Q96NA8 513 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 PRMT1Q99873 361 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CNPY3Q9BT09 278 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 RBM24Q9BX46 236 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 HINT2Q9BX68 163 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 API5Q9BZZ5 524 aaKnown RBP3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 TMEM39BQ9GZU3 492 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 RAB1BQ9H0U4 201 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 KCNN2Q9H2S1 579 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 SLA2Q9H6Q3 261 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 UBTD1Q9HAC8 227 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 MCCC2Q9HCC0 563 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 CSNK1G1Q9HCP0 422 aa3.95□□□□□ -1.78
SMARCA5-202ENST00000508573 C20orf96Q9NUD7 363 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms