RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TMED10P49755 219 aaKnown RBP18.4■□□□□ 0.54
SFXN1-209ENST00000508290 MEOX1P50221 254 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 HMGCS1Q01581 520 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 ZNF763Q0D2J5 394 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 MAP4K2Q12851 820 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 EBPQ15125 230 aaKnown RBP18.4■□□□□ 0.54
SFXN1-209ENST00000508290 HLA-DQA1Q5Y7H0 255 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 IL20RBQ6UXL0 311 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 DGAT2L6Q6ZPD8 337 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 GK5Q6ZS86 529 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 MDGA2Q7Z553 956 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 GHDCQ8N2G8 530 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 LRRC25Q8N386 305 aaPredicted RBP18.4■□□□□ 0.54
SFXN1-209ENST00000508290 RELTQ969Z4 430 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 MAGED4Q96JG8 741 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 FAM111AQ96PZ2 611 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 DLGAP4Q9Y2H0 992 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 POLEQ07864 2286 aa18.4■□□□□ 0.54
SFXN1-209ENST00000508290 PTPN13Q12923 2485 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 ACOT7O00154 380 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 SLC28A1O00337 649 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 ERAL1O75616 437 aaKnown RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 BCAS2O75934 225 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 LDLRP01130 860 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 ANXA4P09525 319 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 CHN1P15882 459 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 PRPH2P23942 346 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 FOXA1P55317 472 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 PSPHP78330 225 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 KRT71Q3SY84 523 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 IKBIPQ70UQ0 350 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 SIAH3Q8IW03 269 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 VWA5B2Q8N398 1253 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 CPSF7Q8N684 471 aaKnown RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 SPACA9Q96E40 222 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 APIPQ96GX9 242 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 GAL3ST4Q96RP7 486 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 GATA5Q9BWX5 397 aaPredicted RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 SSU72Q9NP77 194 aaKnown RBP18.39■□□□□ 0.53
SFXN1-209ENST00000508290 SACM1LQ9NTJ5 587 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 CNIH4Q9P003 139 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 UTS2RQ9UKP6 389 aa18.39■□□□□ 0.53
SFXN1-209ENST00000508290 C2orf92A0A1B0GVN3 265 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 WASHC1A8K0Z3 465 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 NPIPA5E9PKD4 350 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 HRKO00198 91 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 TFECO14948 347 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 AZIN1O14977 448 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 RGS16O15492 202 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 RGS14O43566 566 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 ASNA1O43681 348 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 SLITRK5O94991 958 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 P04436 131 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 FGF4P08620 206 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 IL3P08700 152 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 GP1BBP13224 206 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 CNR1P21554 472 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 ALDH9A1P49189 494 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 NRG3P56975 720 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 KCNK10P57789 538 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF791Q3KP31 576 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 C16orf47Q6ZP98 133 aaPredicted RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 EID3Q8N140 333 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 TCP10LQ8TDR4 215 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 FAM173AQ9BQD7 235 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 OR10A5Q9H207 317 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 C12orf65Q9H3J6 166 aaKnown RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 LIN28AQ9H9Z2 209 aaKnown RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 SUCOQ9UBS9 1254 aaKnown RBP18.38■□□□□ 0.53
SFXN1-209ENST00000508290 NPIPA1Q9UND3 350 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 ENTPD4Q9Y227 616 aa18.38■□□□□ 0.53
SFXN1-209ENST00000508290 HECTD1Q9ULT8 2610 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 SETXQ7Z333 2677 aaKnown RBP18.37■□□□□ 0.53
SFXN1-209ENST00000508290 LRRTM2O43300 516 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 SLC19A2O60779 497 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 FBXO45P0C2W1 286 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ALDH3A1P30838 453 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ST13P50502 369 aaKnown RBP18.37■□□□□ 0.53
SFXN1-209ENST00000508290 RPP38P78345 283 aaKnown RBP18.37■□□□□ 0.53
SFXN1-209ENST00000508290 RAE1P78406 368 aaKnown RBP18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF844Q08AG5 666 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 PRICKLE4Q2TBC4 344 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 TBCELQ5QJ74 424 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 PAOXQ6QHF9 649 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 SLC22A16Q86VW1 577 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF615Q8N8J6 731 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 OR2M7Q8NG81 312 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF675Q8TD23 568 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 C16orf78Q8WTQ4 265 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 UCN3Q969E3 161 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 ZNF681Q96N22 645 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 SECISBP2Q96T21 854 aaKnown RBP18.37■□□□□ 0.53
SFXN1-209ENST00000508290 CCT7Q99832 543 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 MYNNQ9NPC7 610 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 MIEF1Q9NQG6 463 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 PRODH2Q9UF12 536 aa18.37■□□□□ 0.53
SFXN1-209ENST00000508290 USP9YO00507 2555 aaPredicted RBP18.36■□□□□ 0.53
SFXN1-209ENST00000508290 TYROBPO43914 113 aa18.36■□□□□ 0.53
SFXN1-209ENST00000508290 ERLIN1O75477 346 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms