RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 HIST1H2AHQ96KK5 128 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 HIST1H2AJQ99878 128 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MRPL57Q9BQC6 102 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 SELENOSQ9BQE4 189 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 H2AFJQ9BTM1 129 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MRPL46Q9H2W6 279 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MVB12BQ9H7P6 319 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 UNKLQ9H9P5 680 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 SLC22A11Q9NSA0 550 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 POT1Q9NUX5 634 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 IMP3Q9NV31 184 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 NKIRAS1Q9NYS0 192 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TMEM216Q9P0N5 145 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 IFT80Q9P2H3 777 aaPredicted RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 DHCR7Q9UBM7 475 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 POLG2Q9UHN1 485 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 MID2Q9UJV3 735 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 TMCO1Q9UM00 188 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 ASF1AQ9Y294 204 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 WDR37Q9Y2I8 494 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 PLLPQ9Y342 182 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 CFAP20Q9Y6A4 193 aaKnown RBP4.78□□□□□ -1.64
FXN-205ENST00000498653 COLEC10Q9Y6Z7 277 aa4.78□□□□□ -1.64
FXN-205ENST00000498653 ALPK2Q86TB3 2170 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 TMEM120BA0PK00 339 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MBD3L3A6NE82 208 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 OR52A4PA6NMU1 304 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ZNF839A8K0R7 811 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ARHGEF33A8MVX0 844 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 SUPT3HB4E1H0 165 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TMEM150CB9EJG8 249 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 G3V4G9 280 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 H3BQF6 201 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TRIM77I1YAP6 450 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TM9SF1O15321 606 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ZNF749O43361 778 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TYROBPO43914 113 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 OR10H2O60403 315 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 PLIN3O60664 434 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 KERAO60938 352 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 SUPT3HO75486 399 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MED26O95402 600 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CLDN9O95484 217 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 C1orf105O95561 183 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ANXA5P08758 320 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TPBGLP0DKB5 382 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MYL2P10916 166 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MTHFD1P11586 935 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 CPA3P15088 417 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 XRCC1P18887 633 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 BMP5P22003 454 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 HPDP32754 393 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 RPA3P35244 121 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 BDKRB1P46663 353 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 AP1S2P56377 157 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 HILS1P60008 231 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CDKL1Q00532 357 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ASPHQ12797 758 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 PRKG2Q13237 762 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 OR4D1Q15615 310 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TSNQ15631 228 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 NKPD1Q17RQ9 610 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CR1LQ2VPA4 569 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CDKL4Q5MAI5 379 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 RIPPLY2Q5TAB7 128 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 HHATQ5VTY9 493 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CDHR3Q6ZTQ4 885 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 GALNTL5Q7Z4T8 443 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ISCA2Q86U28 154 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 KIF18BQ86Y91 864 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 RBM12BQ8IXT5 1001 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 RAB42Q8N4Z0 105 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ARFGAP2Q8N6H7 521 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 OR5AR1Q8NGP9 310 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 OR9A1PQ8NGU1 263 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 OR5K2Q8NHB8 316 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 MBD3L2Q8NHZ7 208 aaPredicted RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 RDH11Q8TC12 318 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 TCP10LQ8TDR4 215 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ZFPM2Q8WW38 1151 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 SREK1Q8WXA9 508 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 ATL1Q8WXF7 558 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 EXT2Q93063 718 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 RAD51AP1Q96B01 352 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CCDC138Q96M89 665 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 GPR78Q96P69 363 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 FAM111AQ96PZ2 611 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 ATOH8Q96SQ7 321 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 EGFL8Q99944 293 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 HGH1Q9BTY7 390 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 RAB11FIP5Q9BXF6 653 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CNOT10Q9H9A5 744 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 PARVBQ9HBI1 364 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 UTP6Q9NYH9 597 aaKnown RBP4.77□□□□□ -1.65
FXN-205ENST00000498653 NUDT4Q9NZJ9 180 aa4.77□□□□□ -1.65
FXN-205ENST00000498653 CD274Q9NZQ7 290 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms