RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	RIPOR1	Q6ZS17	1223 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	ANKRD46	Q86W74	232 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	OR4N5	Q8IXE1	308 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	PRSS58	Q8IYP2	241 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	PGAM4	Q8N0Y7	254 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	ARHGAP24	Q8N264	748 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	VWA5B2	Q8N398	1253 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	MORN4	Q8NDC4	146 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	OR7G1	Q8NGA0	311 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	OR8J3	Q8NGG0	315 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	OR9A2	Q8NGT5	310 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	SUN3	Q8TAQ9	357 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	LRRC58	Q96CX6	371 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	SLC45A3	Q96JT2	553 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	LPAR4	Q99677	370 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	CXorf21	Q9HAI6	301 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	SERHL	Q9NQF3	203 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	NECTIN3	Q9NQS3	549 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	DDX18	Q9NVP1	670 aa	Known RBP	12.68	□□□□□ -0.38
APTX-231	ENST00000494973	COPS7A	Q9UBW8	275 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	12.68	□□□□□ -0.38
APTX-231	ENST00000494973	GMEB1	Q9Y692	573 aa		12.68	□□□□□ -0.38
APTX-231	ENST00000494973	RNF103-CHMP3	A0A140T963	221 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	TEX51	A0A1B0GUA7	166 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973		A0A1W2PQ72	361 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ASPDH	A6ND91	283 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	WASHC1	A8K0Z3	465 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973		B2RBV5	119 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	EMC8	O43402	210 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	PRAMEF2	O60811	474 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	KLF7	O75840	302 aa	Predicted RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ABCB1	P08183	1280 aa	Predicted RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ADRB1	P08588	477 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ATXN8OS	P0DMR3	200 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	HOXD11	P31277	338 aa	Predicted RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	CHI3L1	P36222	383 aa	Predicted RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ID2	Q02363	134 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ZNF628	Q5EBL2	1059 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	LCN10	Q6JVE6	187 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ZCCHC12	Q6PEW1	402 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ZNF621	Q6ZSS3	439 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ZNF551	Q7Z340	670 aa	Predicted RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	CPEB2	Q7Z5Q1	589 aa	Known RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	RETREG3	Q86VR2	466 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	TMEM151B	Q8IW70	566 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	CLECL1	Q8IZS7	167 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	TSLP	Q969D9	159 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ELP4	Q96EB1	424 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	FBXL20	Q96IG2	436 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	MS4A4E	Q96PG1	132 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	CGREF1	Q99674	301 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	NPAS2	Q99743	824 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	SLC35A5	Q9BS91	424 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	PAIP1	Q9H074	479 aa	Known RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	SPAG4	Q9NPE6	437 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	SLAMF7	Q9NQ25	335 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	ZCCHC3	Q9NUD5	404 aa	Known RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	THUMPD1	Q9NXG2	353 aa	Known RBP	12.67	□□□□□ -0.38
APTX-231	ENST00000494973	DKK4	Q9UBT3	224 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	PRODH2	Q9UF12	536 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	WASF3	Q9UPY6	502 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	CLDN16	Q9Y5I7	305 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	SNX8	Q9Y5X2	465 aa		12.67	□□□□□ -0.38
APTX-231	ENST00000494973	SAGE2P	A6NJ88	616 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	OR6C76	A6NM76	312 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	C17orf105	B2RV13	164 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PEX12	O00623	359 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	TERT	O14746	1132 aa	Known RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	CNOT3	O75175	753 aa	Known RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	AGR2	O95994	175 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	CPA2	P48052	419 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	CCT3	P49368	545 aa	Known RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PRIM2	P49643	509 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	TP53BP2	Q13625	1128 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	EXT1	Q16394	746 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PRICKLE4	Q2TBC4	344 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	LACTB2	Q53H82	288 aa	Predicted RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	SFT2D3	Q587I9	215 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PAGE3	Q5JUK9	113 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	ANKRD37	Q7Z713	158 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	LAPTM4B	Q86VI4	370 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	MARCH9	Q86YJ5	346 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	OR2L13	Q8N349	312 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	ZNF248	Q8NDW4	579 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	FGF11	Q92914	225 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	UCN3	Q969E3	161 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	CTHRC1	Q96CG8	243 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	ANKRD27	Q96NW4	1050 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	SPATA9	Q9BWV2	254 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PNO1	Q9NRX1	252 aa	Known RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	MAT2B	Q9NZL9	334 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	NTM	Q9P121	344 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	MAP10	Q9P2G4	905 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	PRPF19	Q9UMS4	504 aa	Known RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.66	□□□□□ -0.38
APTX-231	ENST00000494973	L3MBTL1	Q9Y468	752 aa		12.66	□□□□□ -0.38
APTX-231	ENST00000494973	TRBV5-3	A0A0A0MS03	114 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	GYG2	O15488	501 aa		12.65	□□□□□ -0.38
APTX-231	ENST00000494973	UMOD	P07911	640 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms