RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	FAM218A	Q96MZ4	157 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	ATF6B	Q99941	703 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	WRAP53	Q9BUR4	548 aa	Known RBP	2.55	□□□□□ -2
CCT6A-208	ENST00000493855	ERVK-6	Q9BXR3	956 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	FNDC4	Q9H6D8	234 aa	Predicted RBP	2.55	□□□□□ -2
CCT6A-208	ENST00000493855	DEPP	Q9NTK1	212 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	SOHLH2	Q9NX45	425 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	TAS2R16	Q9NYV7	291 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	THYN1	Q9P016	225 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	EPS15L1	Q9UBC2	864 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	LHX3	Q9UBR4	397 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	CIDEB	Q9UHD4	219 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	MUTYH	Q9UIF7	546 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	SH3BGRL2	Q9UJC5	107 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	MGAT4B	Q9UQ53	548 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	SLC6A5	Q9Y345	797 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	ZNF175	Q9Y473	711 aa		2.55	□□□□□ -2
CCT6A-208	ENST00000493855	MYH14	Q7Z406	1995 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	IGHV4-30-2	A0A087WSY4	118 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TRGV8	A0A0C4DH27	118 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FAM230A	A0A1W2PPH8	454 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	SH3PXD2B	A1X283	911 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	RGSL1	A5PLK6	1076 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	RNF212B	A8MTL3	300 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	KRTAP29-1	A8MX34	341 aa	Predicted RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855		A8MXK9	166 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855		K7ERI5	159 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CLDN3	O15551	220 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TSPAN2	O60636	221 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TOM1L1	O75674	476 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	IDH1	O75874	414 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	GUCA1C	O95843	209 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	NUDT14	O95848	222 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	HPR	P00739	348 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	HEXB	P07686	556 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FH	P07954	510 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FCGR3A	P08637	254 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	OR9G9	P0C7N8	305 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CFC1B	P0CG36	223 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CFC1	P0CG37	223 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CALCB	P10092	127 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	DPEP1	P16444	411 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	DNAJB1	P25685	340 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	PRDX2	P32119	198 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	KIF5B	P33176	963 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	SPR	P35270	261 aa	Predicted RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	RPS27A	P62979	156 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	HSF2	Q03933	536 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FCHO2	Q0JRZ9	810 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CEBPE	Q15744	281 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CLPP	Q16740	277 aa	Predicted RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	PARP6	Q2NL67	630 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	HKDC1	Q2TB90	917 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	C2CD6	Q53TS8	623 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	LIPK	Q5VXJ0	399 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	ABRAXAS1	Q6UWZ7	409 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	GDPGP1	Q6ZNW5	385 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	C1orf186	Q6ZWK4	172 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TSEN54	Q7Z6J9	526 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	SYVN1	Q86TM6	617 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	SLC22A16	Q86VW1	577 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FAM131B	Q86XD5	332 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	WDR49	Q8IV35	697 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CERS5	Q8N5B7	392 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	OR1K1	Q8NGR3	316 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	SYAP1	Q96A49	352 aa	Predicted RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TADA1	Q96BN2	335 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	RCHY1	Q96PM5	261 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	IWS1	Q96ST2	819 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	C19orf43	Q9BQ61	176 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CHCHD5	Q9BSY4	110 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FICD	Q9BVA6	458 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	NLN	Q9BYT8	704 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	NT5DC2	Q9H857	520 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	PANK3	Q9H999	370 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	YAE1D1	Q9NRH1	226 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	FARSB	Q9NSD9	589 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	GDAP2	Q9NXN4	497 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	CNOT2	Q9NZN8	540 aa	Known RBP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	TUBGCP4	Q9UGJ1	667 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	IL20RA	Q9UHF4	553 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	NIP7	Q9Y221	180 aa	Known RBP eCLIP	2.54	□□□□□ -2
CCT6A-208	ENST00000493855	ATG4B	Q9Y4P1	393 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855		U3KQV3	271 aa		2.54	□□□□□ -2
CCT6A-208	ENST00000493855	MPTX1	A8MV57	137 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	NTN3	O00634	580 aa	Predicted RBP	2.53	□□□□□ -2
CCT6A-208	ENST00000493855	CYB561D2	O14569	222 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	CPLX1	O14810	134 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	TLX2	O43763	284 aa	Predicted RBP	2.53	□□□□□ -2
CCT6A-208	ENST00000493855	VPS26A	O75436	327 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	NXPH4	O95158	308 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	PDGFB	P01127	241 aa	Predicted RBP	2.53	□□□□□ -2
CCT6A-208	ENST00000493855	IFNB1	P01574	187 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	SLC35G4	P0C7Q5	338 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	PAICS	P22234	425 aa	Known RBP	2.53	□□□□□ -2
CCT6A-208	ENST00000493855	EDNRA	P25101	427 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	RPA1	P27694	616 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	PRPH	P41219	470 aa		2.53	□□□□□ -2
CCT6A-208	ENST00000493855	CD86	P42081	329 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms