RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CBX1P83916 185 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 EEF1A2Q05639 463 aaKnown RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 STX5Q13190 355 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CYLC2Q14093 348 aaPredicted RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 PCOLCEQ15113 449 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 MAPKAPK3Q16644 382 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 MPEG1Q2M385 716 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 PRICKLE4Q2TBC4 344 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 ZNF750Q32MQ0 723 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 COQ5Q5HYK3 327 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 FAM69BQ5VUD6 431 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 FAM91A1Q658Y4 838 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 PLAG1Q6DJT9 500 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 BHLHB9Q6PI77 547 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CCDC81Q6ZN84 652 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 VWA5B2Q8N398 1253 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 TRIML2Q8N7C3 387 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 TMEM102Q8N9M5 508 aaPredicted RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 B3GNT7Q8NFL0 401 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 OR9A2Q8NGT5 310 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 RP9Q8TA86 221 aaKnown RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 PSMA8Q8TAA3 256 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 SUN3Q8TAQ9 357 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 M1APQ8TC57 530 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 PTPMT1Q8WUK0 201 aaPredicted RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 PPWD1Q96BP3 646 aaKnown RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 MOAP1Q96BY2 351 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 C8orf44Q96CB5 159 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CMTM5Q96DZ9 223 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 SENP5Q96HI0 755 aaPredicted RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 FBXL20Q96IG2 436 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 IMMP1LQ96LU5 166 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CCDC115Q96NT0 180 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 C3orf14Q9HBI5 128 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 SLAMF7Q9NQ25 335 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 TAS2R9Q9NYW1 312 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 PTGFRNQ9P2B2 879 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 COPS7AQ9UBW8 275 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 LEF1Q9UJU2 399 aaPredicted RBP10.79□□□□□ -0.68
LSM2-214ENST00000493387 FBXL4Q9UKA2 621 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 CFL2Q9Y281 166 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 RAXQ9Y2V3 346 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 NDUFAF1Q9Y375 327 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 NCOR2Q9Y618 2525 aa10.79□□□□□ -0.68
LSM2-214ENST00000493387 MYOCOSA0A1B0GUC4 107 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 OR6C76A6NM76 312 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 C9JVG2 144 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 RFXANKO14593 260 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 NKX2-8O15522 239 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 COQ9O75208 318 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 SEC24DO94855 1032 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 C6orf47O95873 294 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ZFP36L2P47974 494 aaKnown RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 PGDP52209 483 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 TMPRSS3P57727 454 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 SLC26A5P58743 744 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 PRR5P85299 388 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 TLE3Q04726 772 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 FUT7Q11130 342 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 CDC20Q12834 499 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 HSPB3Q12988 150 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ZNF267Q14586 743 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 VPS26BQ4G0F5 336 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 TIGD2Q4W5G0 525 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ZNF628Q5EBL2 1059 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 FAM180BQ6P0A1 224 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 TMEM64Q6YI46 380 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 GK5Q6ZS86 529 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ZNF551Q7Z340 670 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 PCYOX1LQ8NBM8 494 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 NFAM1Q8NET5 270 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 OR4A15Q8NGL6 344 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 OR1N1Q8NGS0 311 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 GOT1L1Q8NHS2 421 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 SLC2A12Q8TD20 617 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 NUDT8Q8WV74 236 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 VPS33AQ96AX1 596 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 CTHRC1Q96CG8 243 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ELP4Q96EB1 424 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 VMP1Q96GC9 406 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 PANX1Q96RD7 426 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 WDR77Q9BQA1 342 aaPredicted RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 RYDENQ9NUL5 291 aaKnown RBP10.78□□□□□ -0.68
LSM2-214ENST00000493387 MAT2BQ9NZL9 334 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 ARMCX1Q9P291 453 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 PRODH2Q9UF12 536 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 VPS4AQ9UN37 437 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 MAN2B2Q9Y2E5 1009 aa10.78□□□□□ -0.68
LSM2-214ENST00000493387 IGHV3-20A0A0C4DH32 117 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 A0A1W2PS29 197 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 TTC36A6NLP5 189 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 CAPN14A8MX76 684 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 EMC8O43402 210 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 ERN1O75460 977 aaKnown RBP10.77□□□□□ -0.69
LSM2-214ENST00000493387 SOX30O94993 753 aa10.77□□□□□ -0.69
LSM2-214ENST00000493387 CPSF4O95639 269 aaKnown RBP10.77□□□□□ -0.69
LSM2-214ENST00000493387 DDAH2O95865 285 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms