RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C12orf65Q9H3J6 166 aaKnown RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 ADAP2Q9NPF8 381 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 CNIH4Q9P003 139 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 GDF2Q9UK05 429 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 DTX4Q9Y2E6 619 aa10.59□□□□□ -0.71
TRIM56-204ENST00000487252 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
TRIM56-204ENST00000487252 TMEM120BA0PK00 339 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 GOT2P00505 430 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 IFNB1P01574 187 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 CYP4B1P13584 511 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 HNF1AP20823 631 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 NAGLUP54802 743 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 ACVR1Q04771 509 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 PWP1Q13610 501 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 MPP2Q14168 576 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 POU6F1Q14863 301 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 FASTKD3Q14CZ7 662 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 DARS2Q6PI48 645 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 AFTPHQ6ULP2 937 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 TRABD2AQ86V40 505 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 PLD6Q8N2A8 252 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 ZNF321PQ8N8H1 164 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 FAM71DQ8N9W8 422 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 MFSD9Q8NBP5 474 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 CKAP2Q8WWK9 683 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 ABTB1Q969K4 478 aaPredicted RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 FAM111AQ96PZ2 611 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 FERMT1Q9BQL6 677 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 GRIP2Q9C0E4 1043 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 C10orf88Q9H8K7 445 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 EML4Q9HC35 981 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 SSU72Q9NP77 194 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 SENP1Q9P0U3 644 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 PAK5Q9P286 719 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 CTNNAL1Q9UBT7 734 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 CNOT11Q9UKZ1 510 aaKnown RBP10.58□□□□□ -0.72
TRIM56-204ENST00000487252 KCNS2Q9ULS6 477 aa10.58□□□□□ -0.72
TRIM56-204ENST00000487252 EXOC1LA0A1B0GW35 172 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 TCRBV7S3A2A0A539 114 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 ANKRD33BA6NCL7 494 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 TMPRSS2O15393 492 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 AVILO75366 819 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 CRHP06850 196 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 POU2F1P14859 743 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 CREB1P16220 341 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 CHMP24386 653 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 RBL1P28749 1068 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 PRPSAP1Q14558 356 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 ELAVL1Q15717 326 aaKnown RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 GKAP1Q5VSY0 366 aaPredicted RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 FNDC7Q5VTL7 733 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 FAM166AQ6J272 317 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 PPP1R21Q6ZMI0 780 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 CDKL3Q8IVW4 592 aaPredicted RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 LRRC34Q8IZ02 419 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 ZBED8Q8IZ13 594 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 TMEM132CQ8N3T6 1108 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 MORN4Q8NDC4 146 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 MCUQ8NE86 351 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 SEMA6DQ8NFY4 1073 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 OR4L1Q8NH43 312 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 PTPMT1Q8WUK0 201 aaPredicted RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 GTPBP3Q969Y2 492 aaKnown RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 SPACA9Q96E40 222 aaPredicted RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 C11orf24Q96F05 449 aaPredicted RBP10.57□□□□□ -0.72
TRIM56-204ENST00000487252 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 ACSS3Q9H6R3 686 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 SH2B3Q9UQQ2 575 aa10.57□□□□□ -0.72
TRIM56-204ENST00000487252 H7C0C1 242 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 GFYI3L273 518 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 VENTXO95231 258 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 ACTL6AO96019 429 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 CGAP01215 116 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 ZNF888P0CJ79 500 aaPredicted RBP10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SMIM10L1P0DMW3 83 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SLC25A16P16260 332 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PHBP35232 272 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 GMPRP36959 345 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PPARGP37231 505 aaPredicted RBP10.56□□□□□ -0.72
TRIM56-204ENST00000487252 ATP5OP48047 213 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 HSD17B7P56937 341 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 DSCR9P59020 149 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PGGHGQ32M88 737 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 VWA1Q6PCB0 445 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 ABHD17CQ6PCB6 329 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 CPLX4Q7Z7G2 160 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SPNS2Q8IVW8 549 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PDIK1LQ8N165 341 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 CA13Q8N1Q1 262 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 OR5L2Q8NGL0 311 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 UTP15Q8TED0 518 aaKnown RBP10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SMAP2Q8WU79 429 aaPredicted RBP10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SREK1Q8WXA9 508 aaKnown RBP10.56□□□□□ -0.72
TRIM56-204ENST00000487252 CTHRC1Q96CG8 243 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 SMIM10Q96HG1 83 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 ZNF597Q96LX8 424 aa10.56□□□□□ -0.72
TRIM56-204ENST00000487252 JSRP1Q96MG2 331 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms