RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 TICAM1Q8IUC6 712 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 VWA5B2Q8N398 1253 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 OR7G1Q8NGA0 311 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 NUBPLQ8TB37 319 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.03■□□□□ 0.64
VARS-224ENST00000479051 CPT1CQ8TCG5 803 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 CNRIP1Q96F85 164 aaPredicted RBP19.03■□□□□ 0.64
VARS-224ENST00000479051 C5orf34Q96MH7 638 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 BBS4Q96RK4 519 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 SORT1Q99523 831 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 C20orf27Q9GZN8 174 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 RYDENQ9NUL5 291 aaKnown RBP19.03■□□□□ 0.64
VARS-224ENST00000479051 ANKRD10Q9NXR5 420 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 LRFN1Q9P244 771 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 MYOTQ9UBF9 498 aa19.03■□□□□ 0.64
VARS-224ENST00000479051 ATP6AP2A0A1C7CYW4 349 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 ATP6AP2O75787 350 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 PLA2G2AP14555 144 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 SDC1P18827 310 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 NTSP30990 170 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 MPIP34949 423 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 TRHRP34981 398 aaPredicted RBP19.02■□□□□ 0.64
VARS-224ENST00000479051 HLCSP50747 726 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 MLLT10P55197 1068 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 INAQ16352 499 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 RPUSD3Q6P087 351 aaKnown RBP19.02■□□□□ 0.64
VARS-224ENST00000479051 GPALPP1Q8IXQ4 340 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 FNDC5Q8NAU1 212 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 DOK4Q8TEW6 326 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 ASB15Q8WXK1 588 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 TMEM125Q96AQ2 219 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 C3orf30Q96M34 536 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 ZNF681Q96N22 645 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 TSSK3Q96PN8 268 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 EIF3LQ9Y262 564 aaKnown RBP19.02■□□□□ 0.64
VARS-224ENST00000479051 CFL2Q9Y281 166 aa19.02■□□□□ 0.64
VARS-224ENST00000479051 UQCRHLA0A096LP55 91 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 HRKO00198 91 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 WWP2O00308 870 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 PRKNO60260 465 aaPredicted RBP19.01■□□□□ 0.63
VARS-224ENST00000479051 OR2J2O76002 312 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 TACR1P25103 407 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 HK2P52789 917 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 SLC37A1P57057 533 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 FUT7Q11130 342 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 MAP4K2Q12851 820 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 INPP5JQ15735 1006 aaPredicted RBP19.01■□□□□ 0.63
VARS-224ENST00000479051 PRICKLE4Q2TBC4 344 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 ZNF766Q5HY98 468 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 C6orf136Q5SQH8 315 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 HLA-DQA1Q5Y7H0 255 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 TMEM178AQ8NBL3 297 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 SLC22A8Q8TCC7 542 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 GAL3ST4Q96RP7 486 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 LIN28AQ9H9Z2 209 aaKnown RBP19.01■□□□□ 0.63
VARS-224ENST00000479051 AGPAT4Q9NRZ5 378 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 TAS2R7Q9NYW3 318 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 PCDHGB6Q9Y5F9 930 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 COPG1Q9Y678 874 aaKnown RBP19.01■□□□□ 0.63
VARS-224ENST00000479051 ZNF462Q96JM2 2506 aa19.01■□□□□ 0.63
VARS-224ENST00000479051 BSNQ9UPA5 3926 aa19■□□□□ 0.63
VARS-224ENST00000479051 A8MVJ9 347 aa19■□□□□ 0.63
VARS-224ENST00000479051 SLCO1B7G3V0H7 640 aa19■□□□□ 0.63
VARS-224ENST00000479051 J3QKU1 62 aa19■□□□□ 0.63
VARS-224ENST00000479051 KLF11O14901 512 aa19■□□□□ 0.63
VARS-224ENST00000479051 SNNO75324 88 aaPredicted RBP19■□□□□ 0.63
VARS-224ENST00000479051 VPS4BO75351 444 aa19■□□□□ 0.63
VARS-224ENST00000479051 SASH3O75995 380 aa19■□□□□ 0.63
VARS-224ENST00000479051 PRPS2P11908 318 aa19■□□□□ 0.63
VARS-224ENST00000479051 BCKDHAP12694 445 aa19■□□□□ 0.63
VARS-224ENST00000479051 SSTR4P31391 388 aa19■□□□□ 0.63
VARS-224ENST00000479051 RPL3P39023 403 aaKnown RBP19■□□□□ 0.63
VARS-224ENST00000479051 PPP2R2AP63151 447 aa19■□□□□ 0.63
VARS-224ENST00000479051 MPEG1Q2M385 716 aa19■□□□□ 0.63
VARS-224ENST00000479051 SMU1Q2TAY7 513 aa19■□□□□ 0.63
VARS-224ENST00000479051 FAM180BQ6P0A1 224 aa19■□□□□ 0.63
VARS-224ENST00000479051 OPN5Q6U736 354 aa19■□□□□ 0.63
VARS-224ENST00000479051 R3HCC1LQ7Z5L2 792 aaKnown RBP19■□□□□ 0.63
VARS-224ENST00000479051 C9orf40Q8IXQ3 194 aa19■□□□□ 0.63
VARS-224ENST00000479051 CCDC116Q8IYX3 515 aa19■□□□□ 0.63
VARS-224ENST00000479051 FAM9CQ8IZT9 166 aa19■□□□□ 0.63
VARS-224ENST00000479051 CYP4Z2PQ8N1L4 340 aa19■□□□□ 0.63
VARS-224ENST00000479051 CISD2Q8N5K1 135 aaKnown RBP19■□□□□ 0.63
VARS-224ENST00000479051 MDS2Q8NDY4 140 aa19■□□□□ 0.63
VARS-224ENST00000479051 ERP27Q96DN0 273 aa19■□□□□ 0.63
VARS-224ENST00000479051 EGLN2Q96KS0 407 aa19■□□□□ 0.63
VARS-224ENST00000479051 SIGLEC12Q96PQ1 595 aa19■□□□□ 0.63
VARS-224ENST00000479051 TRIM4Q9C037 500 aa19■□□□□ 0.63
VARS-224ENST00000479051 OR10A5Q9H207 317 aa19■□□□□ 0.63
VARS-224ENST00000479051 REEP4Q9H6H4 257 aa19■□□□□ 0.63
VARS-224ENST00000479051 TRIM45Q9H8W5 580 aaPredicted RBP19■□□□□ 0.63
VARS-224ENST00000479051 HPF1Q9NWY4 346 aa19■□□□□ 0.63
VARS-224ENST00000479051 MAT2BQ9NZL9 334 aa19■□□□□ 0.63
VARS-224ENST00000479051 BCAP29Q9UHQ4 241 aa19■□□□□ 0.63
VARS-224ENST00000479051 ERVK-11Q9UQG0 969 aa19■□□□□ 0.63
VARS-224ENST00000479051 TMEM200CA6NKL6 621 aa18.99■□□□□ 0.63
VARS-224ENST00000479051 BCAS2O75934 225 aaPredicted RBP18.99■□□□□ 0.63
VARS-224ENST00000479051 SLITRK5O94991 958 aa18.99■□□□□ 0.63
VARS-224ENST00000479051 CT62P0C5K7 136 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms