RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SLC25A16P16260 332 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF708P17019 499 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 SAT1P21673 171 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 DPP4P27487 766 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 GCKP35557 465 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 STXBP1P61764 594 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 IGLV3-21P80748 117 aaPredicted RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 ID2Q02363 134 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 FAPQ12884 760 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 RBBP5Q15291 538 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 GUSBP1Q15486 140 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 FAM166AQ6J272 317 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 UGT3A1Q6NUS8 523 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 CES3Q6UWW8 571 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 STAC2Q6ZMT1 411 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 DTX2Q86UW9 622 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 KLHDC8AQ8IYD2 350 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 CPNE9Q8IYJ1 553 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 OTUD6BQ8N6M0 293 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 SLC35B2Q8TB61 432 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 CD200R1Q8TD46 325 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 SLC5A11Q8WWX8 675 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 PPWD1Q96BP3 646 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 IQCDQ96DY2 449 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 FBXL20Q96IG2 436 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 GPR21Q99679 349 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 BPIFA3Q9BQP9 254 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 KIFC1Q9BW19 673 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 WWTR1Q9GZV5 400 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 SAP130Q9H0E3 1048 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 ZNF696Q9H7X3 374 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 CHODLQ9H9P2 273 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 EML4Q9HC35 981 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 PTBP2Q9UKA9 531 aaKnown RBP6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 INTUQ9ULD6 942 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 B3GALT5Q9Y2C3 310 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 RNF115Q9Y4L5 304 aa6.59□□□□□ -1.35
SPTLC1-205ENST00000477888 PRKDCP78527 4128 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 LOC100289279A0A1B0GTE1 492 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 A0A1W2PP18 115 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TLDC2A0PJX2 215 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TMEM89A2RUT3 159 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SLC22A20A6NK97 555 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 BTNL10A8MVZ5 291 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TMEM229AB2RXF0 380 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 FTCDO95954 541 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SERPINC1P01008 464 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 CLPSP04118 112 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 C8GP07360 202 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 F7P08709 466 aaPredicted RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 OGNP20774 298 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 HNF1AP20823 631 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 USF1P22415 310 aaPredicted RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 CTNNA1P35221 906 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 FDFT1P37268 417 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 STT3AP46977 705 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 GZMKP49863 264 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NUDT6P53370 316 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 PLA2G16P53816 162 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 CLDN15P56746 228 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SLC37A1P57057 533 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SESN2P58004 480 aaPredicted RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SIRPAP78324 504 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 LSM11P83369 360 aaKnown RBP eCLIP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 PCDH1Q08174 1060 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 DHX9Q08211 1270 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 RCN2Q14257 317 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 EBPQ15125 230 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 BCL2A1Q16548 175 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NRF1Q16656 503 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ADPRMQ3LIE5 342 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF672Q499Z4 452 aaPredicted RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NCMAPQ5T1S8 102 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NEPROQ6NW34 567 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ABHD17CQ6PCB6 329 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 CLEC2AQ6UVW9 174 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NXPE4Q6UWF7 544 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ANGPTL8Q6UXH0 198 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 WFDC8Q8IUA0 241 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TAGAPQ8N103 731 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 WDSUB1Q8N9V3 476 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF511Q8NB15 262 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 C7orf57Q8NEG2 295 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 OR1J4Q8NGS1 313 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 EEF1AKMT1Q8WVE0 214 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 PROX1Q92786 737 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TP53INP1Q96A56 240 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 MSI2Q96DH6 328 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 RBM18Q96H35 190 aaKnown RBP6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 TSNARE1Q96NA8 513 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 GAL3ST4Q96RP7 486 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 SERINC2Q96SA4 455 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 CHP1Q99653 195 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 AIF1LQ9BQI0 150 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 NTMT1Q9BV86 223 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 OR2B2Q9GZK3 357 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 IL22Q9GZX6 179 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 RNF122Q9H9V4 155 aa6.58□□□□□ -1.36
SPTLC1-205ENST00000477888 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms