RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CNTNAP2Q9UHC6 1331 aa4.89□□□□□ -1.63
VPS50-212ENST00000476413 F8WDY8 70 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 K7EPI3 171 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 AKR7A3O95154 331 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 IGHG1P01857 330 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 ADORA3P0DMS8 318 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 MBL2P11226 248 aaPredicted RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 FOSL2P15408 326 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 PTMSP20962 102 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 MAGEA4P43358 317 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 NDUFV3P56181 108 aaKnown RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 POLR2FP61218 127 aaKnown RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 CDKL1Q00532 357 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 DPYSQ14117 519 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 ZNF699Q32M78 642 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 POM121L1PQ3SYA9 428 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 ASRGL1Q7L266 308 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 ZBTB44Q8NCP5 570 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 U2AF1L4Q8WU68 220 aaKnown RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 PCNPQ8WW12 178 aaKnown RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 FAM124BQ9H5Z6 455 aaPredicted RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 ROPN1Q9HAT0 212 aaPredicted RBP4.88□□□□□ -1.63
VPS50-212ENST00000476413 NUDT4Q9NZJ9 180 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 NCAPD2Q15021 1401 aa4.88□□□□□ -1.63
VPS50-212ENST00000476413 FER1L5A0AVI2 2057 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 IGLON5A6NGN9 336 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 TMCO5BA8MYB1 307 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 LANCL1O43813 399 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 SMPD2O60906 423 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 TMOD1P28289 359 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 NUMBP49757 651 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 PRELPP51888 382 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 CCL14Q16627 93 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 HAGHQ16775 308 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 MS4A18Q3C1V0 323 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 LRIT3Q3SXY7 679 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 UNC50Q53HI1 259 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 GFI1BQ5VTD9 330 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 NUFIP2Q7Z417 695 aaKnown RBP4.87□□□□□ -1.63
VPS50-212ENST00000476413 ADCK1Q86TW2 530 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 FAM131BQ86XD5 332 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 CCDC71Q8IV32 467 aaPredicted RBP4.87□□□□□ -1.63
VPS50-212ENST00000476413 TEX9Q8N6V9 391 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 OR52B4Q8NGK2 314 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 NR4A3Q92570 626 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 MCHR2Q969V1 340 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 C18orf12Q96KH6 178 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 CCDC28BQ9BUN5 200 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 MCRIP2Q9BUT9 160 aaKnown RBP4.87□□□□□ -1.63
VPS50-212ENST00000476413 LIME1Q9H400 295 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 DCTPP1Q9H773 170 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 NT5DC2Q9H857 520 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 ZNF446Q9NWS9 450 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 TUBGCP4Q9UGJ1 667 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 SALL1Q9NSC2 1324 aa4.87□□□□□ -1.63
VPS50-212ENST00000476413 IGLV4-3A0A075B6K6 122 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 A0A0A6YYD4 124 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 DUSP11O75319 330 aaKnown RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 STK17BO94768 372 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 OAS1P00973 400 aaKnown RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 RALAP11233 206 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 GP9P14770 177 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 MT3P25713 68 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 SLC1A6P48664 564 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 SGSHP51688 502 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 SRPXP78539 464 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 NME3Q13232 169 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 ENPP2Q13822 863 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 BTG3Q14201 252 aaPredicted RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 FASTKQ14296 549 aaKnown RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 SIX1Q15475 284 aaPredicted RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 MRGPRG-AS1Q2M3A8 158 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 ACSF3Q4G176 576 aaPredicted RBP4.86□□□□□ -1.63
VPS50-212ENST00000476413 C14orf177Q52M58 125 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 C2CD6Q53TS8 623 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 DPY19L2P2Q6ZN68 376 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 BCORP1Q8N888 145 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 ZNF781Q8N8C0 355 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 OR1B1Q8NGR6 318 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 LRRC15Q8TF66 581 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 NCLNQ969V3 563 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 TSGA13Q96PP4 275 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 RAB11FIP5Q9BXF6 653 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 ACTR8Q9H981 624 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 Q9HAA7 133 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 EPS15L1Q9UBC2 864 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 AURKCQ9UQB9 309 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 RNF115Q9Y4L5 304 aa4.86□□□□□ -1.63
VPS50-212ENST00000476413 IGHV3OR16-10A0A075B7F0 116 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 TRGV8A0A0C4DH27 118 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 NTN3O00634 580 aaPredicted RBP4.85□□□□□ -1.63
VPS50-212ENST00000476413 BUB1O43683 1085 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 APBB3O95704 486 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 ATP4BP51164 291 aa4.85□□□□□ -1.63
VPS50-212ENST00000476413 TCHHL1Q5QJ38 904 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms