RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ZNF385BQ569K4 471 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 CRB2Q5IJ48 1285 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 AGAP7PQ5VUJ5 663 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 FAM180BQ6P0A1 224 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 CCDC116Q8IYX3 515 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 LGI4Q8N135 537 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 KRTCAP2Q8N6L1 136 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 OR8K3Q8NH51 312 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 BRIX1Q8TDN6 353 aaKnown RBP17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 TESCQ96BS2 214 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 CTHRC1Q96CG8 243 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 COQ8BQ96D53 544 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 ERP27Q96DN0 273 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 AGAP4Q96P64 663 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 UBL7Q96S82 380 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 NUDT9Q9BW91 350 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 OR8D2Q9GZM6 311 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 MAT2BQ9NZL9 334 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 SH3BP4Q9P0V3 963 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF223Q9UK11 482 aaPredicted RBP17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 GPR45Q9Y5Y3 372 aa17.68■□□□□ 0.42
CTDSP1-207ENST00000473420 TRBV11-1A0A0K0K1C0 115 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ALPPP05187 535 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 CT62P0C5K7 136 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 FAM87AP0C7U9 286 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 SOX11P35716 441 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 MRPL19P49406 292 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 NCBP2P52298 156 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■□□□ 12
CTDSP1-207ENST00000473420 MGAT2Q10469 447 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 PDCD4Q53EL6 469 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF628Q5EBL2 1059 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 CPTPQ5TA50 214 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 TMEM198Q66K66 360 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ANKRD26P1Q6NSI1 321 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 TCTN3Q6NUS6 607 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 HPS6Q86YV9 775 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ARMC10Q8N2F6 343 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 VWA5B2Q8N398 1253 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 SLC5A8Q8N695 610 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 LSM14AQ8ND56 463 aaKnown RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 OR7G1Q8NGA0 311 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 OR7A2PQ8NGA2 310 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 RFWD2Q8NHY2 731 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ZFP28Q8NHY6 868 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ZBED6CLQ96FA7 236 aaPredicted RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ABHD17AQ96GS6 310 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 AMDHD1Q96NU7 426 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 CNPPD1Q9BV87 410 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 DEFB126Q9BYW3 111 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 BHLHE41Q9C0J9 482 aaPredicted RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ACSS1Q9NUB1 689 aaPredicted RBP17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF639Q9UID6 485 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 TEKT2Q9UIF3 430 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 ERVK-19Q9WJR5 959 aa17.67■□□□□ 0.42
CTDSP1-207ENST00000473420 OR6C76A6NM76 312 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 SLC37A1P57057 533 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 SRSF11Q05519 484 aaKnown RBP17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 MLC1Q15049 377 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 RPS6KA2Q15349 733 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 MPEG1Q2M385 716 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 CGB2Q6NT52 195 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 PCSK4Q6UW60 755 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 ISLR2Q6UXK2 745 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 HSDL2Q6YN16 418 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 RNF111Q6ZNA4 994 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 KIF2BQ8N4N8 673 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 SIRT6Q8N6T7 355 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 AMER2Q8N7J2 671 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 GLB1L3Q8NCI6 653 aaPredicted RBP17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 CHMP6Q96FZ7 201 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF354BQ96LW1 612 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 GLIPR2Q9H4G4 154 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 SLAMF7Q9NQ25 335 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 SDR39U1Q9NRG7 319 aaPredicted RBP17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 ZIM2Q9NZV7 527 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 DCTN4Q9UJW0 460 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF451Q9Y4E5 1061 aa17.66■□□□□ 0.42
CTDSP1-207ENST00000473420 A0A0G2JND7 137 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 E9PBE3 544 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 HRKO00198 91 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 CDK2AP1O14519 115 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 BCAS2O75934 225 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 ZFAND5O76080 213 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 CLPSP04118 112 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 LAMP1P11279 417 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 S1PR1P21453 382 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 SOX18P35713 384 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 RAPSNQ13702 412 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 LTB4RQ15722 352 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 MEP1AQ16819 746 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 IGFL2Q6UWQ7 119 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 ZNF321PQ8N8H1 164 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 EXD3Q8N9H8 876 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 OR8J2Q8NGG1 315 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 OR9A2Q8NGT5 310 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 C9orf43Q8TAL5 461 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 CIDECQ96AQ7 238 aaPredicted RBP17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 LMF1Q96S06 567 aa17.65■□□□□ 0.42
CTDSP1-207ENST00000473420 DUSP26Q9BV47 211 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms