RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PRICKLE4Q2TBC4 344 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 CPTPQ5TA50 214 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 HSDL2Q6YN16 418 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 CCDC116Q8IYX3 515 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 TM9SF4Q92544 642 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 GFM2Q969S9 779 aaKnown RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 TESCQ96BS2 214 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 CTHRC1Q96CG8 243 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 ZBED6CLQ96FA7 236 aaPredicted RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 ZNF354BQ96LW1 612 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 ZNF317Q96PQ6 595 aaPredicted RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 OR52B2Q96RD2 323 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 DEFB126Q9BYW3 111 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 BHLHE41Q9C0J9 482 aaPredicted RBP18.61■□□□□ 0.57
SF1-213ENST00000472725 OR8D2Q9GZM6 311 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 CFL2Q9Y281 166 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 GPR45Q9Y5Y3 372 aa18.61■□□□□ 0.57
SF1-213ENST00000472725 A6NL46 340 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 MASP2O00187 686 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 ANKRD28O15084 1053 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 PDPK1O15530 556 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 SOX11P35716 441 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 PGDP52209 483 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 ZNF267Q14586 743 aaPredicted RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 RPS6KA2Q15349 733 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 ZNF750Q32MQ0 723 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 PDCD4Q53EL6 469 aaKnown RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 IGFL2Q6UWQ7 119 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 IGFL3Q6UXB1 125 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 ISLR2Q6UXK2 745 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 DGAT2L6Q6ZPD8 337 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 VWA5B2Q8N398 1253 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 GLB1L3Q8NCI6 653 aaPredicted RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 OR5L2Q8NGL0 311 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 C9orf43Q8TAL5 461 aaPredicted RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 SUN3Q8TAQ9 357 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 BRIX1Q8TDN6 353 aaKnown RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 ABHD17AQ96GS6 310 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 NUDT9Q9BW91 350 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 FGFR1OP2Q9NVK5 253 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 TMEM45AQ9NWC5 275 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 FAM53CQ9NYF3 392 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 MAT2BQ9NZL9 334 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 ZNF639Q9UID6 485 aa18.6■□□□□ 0.57
SF1-213ENST00000472725 DSPP15924 2871 aaKnown RBP18.6■□□□□ 0.57
SF1-213ENST00000472725 LAMA5O15230 3695 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 CPAMD8Q8IZJ3 1885 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 A0A087WV62 115 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 A0A1W2PS29 197 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 PLOD2O00469 737 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 ATXN7O15265 892 aaPredicted RBP18.59■□□□□ 0.57
SF1-213ENST00000472725 FAM87AP0C7U9 286 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 NCBP2P52298 156 aaKnown RBP eCLIP18.59■□□□□ 0.57
SF1-213ENST00000472725 MGAT2Q10469 447 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 MFAP5Q13361 173 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 MEP1AQ16819 746 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 ZNF628Q5EBL2 1059 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 METTL21CQ5VZV1 264 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 RNF111Q6ZNA4 994 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 OR8J2Q8NGG1 315 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 NUBPLQ8TB37 319 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 AMDHD1Q96NU7 426 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 CNPPD1Q9BV87 410 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 RNF32Q9H0A6 362 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 EPS8L2Q9H6S3 715 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 NPHS2Q9NP85 383 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 SDR39U1Q9NRG7 319 aaPredicted RBP18.59■□□□□ 0.57
SF1-213ENST00000472725 MRGBPQ9NV56 204 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 ZIM2Q9NZV7 527 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 ABI3Q9P2A4 366 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 TRIM33Q9UPN9 1127 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 ERVK-19Q9WJR5 959 aa18.59■□□□□ 0.57
SF1-213ENST00000472725 LOC400499M0QZD8 3231 aa18.58■□□□□ 0.57
SF1-213ENST00000472725 CACNA1GO43497 2377 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 TRBV11-1A0A0K0K1C0 115 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 PLOD3O60568 738 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 CELA2AP08217 269 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 SLC37A1P57057 533 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 DUSP2Q05923 314 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 PRSS53Q2L4Q9 553 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 ABHD17BQ5VST6 288 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 RPS19BP1Q86WX3 136 aaKnown RBP18.58■□□□□ 0.56
SF1-213ENST00000472725 KRTCAP2Q8N6L1 136 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 EXD3Q8N9H8 876 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 OR7A2PQ8NGA2 310 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 CHMP6Q96FZ7 201 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 ZBTB18Q99592 522 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 EBF4Q9BQW3 602 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 DUSP26Q9BV47 211 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 GLIPR2Q9H4G4 154 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 CLMPQ9H6B4 373 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 PTGFRNQ9P2B2 879 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 ZNF223Q9UK11 482 aaPredicted RBP18.58■□□□□ 0.56
SF1-213ENST00000472725 KMT2BQ9UMN6 2715 aaPredicted RBP18.58■□□□□ 0.56
SF1-213ENST00000472725 MGAQ8IWI9 3026 aa18.58■□□□□ 0.56
SF1-213ENST00000472725 E9PBE3 544 aa18.57■□□□□ 0.56
SF1-213ENST00000472725 S1PR1P21453 382 aa18.57■□□□□ 0.56
SF1-213ENST00000472725 ATP4BP51164 291 aa18.57■□□□□ 0.56
SF1-213ENST00000472725 MANFP55145 182 aaKnown RBP18.57■□□□□ 0.56
SF1-213ENST00000472725 STX1BP61266 288 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms