RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 BSGP35613 385 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 CCNG1P51959 295 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 FOLH1Q04609 750 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 TBL3Q12788 808 aaKnown RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF630Q2M218 657 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 GGTA1PQ4G0N0 100 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 CMPK2Q5EBM0 449 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 PAOXQ6QHF9 649 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 CYP20A1Q6UW02 462 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 IL20RBQ6UXL0 311 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 RTL4Q6ZR62 310 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 FAM47EQ6ZV65 393 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 NUDT13Q86X67 352 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ST13P4Q8IZP2 240 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SLC15A4Q8N697 577 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 PTGR2Q8N8N7 351 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 PHF21BQ96EK2 531 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SENP5Q96HI0 755 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 SERPINI1Q99574 410 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 PAIP2Q9BPZ3 127 aaKnown RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 VKORC1Q9BQB6 163 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF717Q9BY31 904 aaPredicted RBP12.51□□□□□ -0.41
HMGN1-211ENST00000471260 MYLK2Q9H1R3 596 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 WDR41Q9HAD4 459 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 RNF11Q9Y3C5 154 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 ASB4Q9Y574 426 aa12.51□□□□□ -0.41
HMGN1-211ENST00000471260 LRRC14BA6NHZ5 514 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ACOT7O00154 380 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 HS6ST1O60243 411 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 OR6B1O95007 311 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 GPR75O95800 540 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 SNRPAP09012 282 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ALOX15P16050 662 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 CNR1P21554 472 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 PTGS2P35354 604 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 SOX3P41225 446 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ETV4P43268 484 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 KCNJ2P63252 427 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ADORA2A-AS1P86434 159 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 NDUFAF5Q5TEU4 345 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 FRG2Q64ET8 278 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 C18orf63Q68DL7 685 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ARHGAP11AQ6P4F7 1023 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 GK5Q6ZS86 529 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 DND1Q8IYX4 353 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 AGAP11Q8TF27 550 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 MARVELD3Q96A59 401 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 FBXL20Q96IG2 436 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 RSRC1Q96IZ7 334 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 SCYL1Q96KG9 808 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 FRG2BQ96QU4 278 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 SORBS1Q9BX66 1292 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 C1QTNF3Q9BXJ4 246 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 IQCGQ9H095 443 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 MMADHCQ9H3L0 296 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 LIN28AQ9H9Z2 209 aaKnown RBP12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF358Q9NW07 568 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 XPR1Q9UBH6 696 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 ADAM29Q9UKF5 820 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
HMGN1-211ENST00000471260 NCOA6Q14686 2063 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-211ENST00000471260 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 MYOCOSA0A1B0GUC4 107 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OR6C76A6NM76 312 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 TRIM49D1C9J1S8 452 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OR7A17O14581 309 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OTCP00480 354 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 KRT16P08779 473 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 NR2F6P10588 404 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 HTR1EP28566 365 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 PTGER1P34995 402 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ARL1P40616 181 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-211ENST00000471260 NEK2P51955 445 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 GPR85P60893 370 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ID2Q02363 134 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 KRT72Q14CN4 511 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ATG16L1Q676U5 607 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 TIFABQ6ZNK6 161 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 C16orf47Q6ZP98 133 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-211ENST00000471260 PAGE2Q7Z2X7 111 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 SLC22A16Q86VW1 577 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OR4N5Q8IXE1 308 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 ZNF321PQ8N8H1 164 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OR2M7Q8NG81 312 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 OR52B6Q8NGF0 335 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 FAM57AQ8TBR7 257 aa12.49□□□□□ -0.41
HMGN1-211ENST00000471260 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms