RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 Q9HAA7 133 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SLC25A19Q9HC21 320 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TUFT1Q9NNX1 390 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 MIEF1Q9NQG6 463 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 GDF3Q9NR23 364 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 TECRQ9NZ01 308 aaKnown RBP0.94□□□□□ -2.26
UBXN4-207ENST00000471246 RAI14Q9P0K7 980 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 SWAP70Q9UH65 585 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 KLHL21Q9UJP4 597 aa0.94□□□□□ -2.26
UBXN4-207ENST00000471246 A8MX80 341 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PANO1I0J062 215 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PSMD3O43242 534 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ATP9AO75110 1047 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 NME6O75414 186 aaPredicted RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 RAD51DO75771 328 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 STBD1O95210 358 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 APBB3O95704 486 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 NUDT14O95848 222 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 SLC16A8O95907 504 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GOT2P00505 430 aaKnown RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GH1P01241 217 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 NUDT17P0C025 328 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TPBGLP0DKB5 382 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 C8orf89P0DMQ9 161 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CT45A8P0DMV1 189 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CT45A9P0DMV2 189 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PVRP15151 417 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 IFNAR1P17181 557 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CASTP20810 708 aaKnown RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TRPC1P48995 793 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TKTL1P51854 596 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ARHGDIBP52566 201 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 KCNK10P57789 538 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GABPAQ06546 454 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CD47Q08722 323 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ASAH1Q13510 395 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ZNF658BQ4V348 819 aaPredicted RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CT45A2Q5DJT8 189 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 MS4A13Q5J8X5 152 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CELF3Q5SZQ8 465 aaKnown RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 DDI2Q5TDH0 399 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 LRRC38Q5VT99 294 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 STEAP1BQ6NZ63 245 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 SHQ1Q6PI26 577 aaKnown RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 DCLRE1AQ6PJP8 1040 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 APOOLQ6UXV4 268 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PP632Q6XCG6 107 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ADAMTSL5Q6ZMM2 481 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TIFABQ6ZNK6 161 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PRSS48Q7RTY5 328 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 SIAH3Q8IW03 269 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GPR65Q8IYL9 337 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ENTHD1Q8IYW4 607 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CEND1Q8N111 149 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 SIX6OS1Q8N1H7 587 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 THEM5Q8N1Q8 247 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CCDC89Q8N998 374 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 Q8N9G6 341 aaPredicted RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ATAD1Q8NBU5 361 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GGHQ92820 318 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 SLCO4A1Q96BD0 722 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 AP2M1Q96CW1 435 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CDKN2AIPNLQ96HQ2 116 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 IMMP1LQ96LU5 166 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TECTBQ96PL2 329 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 PRAM1Q96QH2 718 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 C19orf43Q9BQ61 176 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 MLPHQ9BV36 600 aaPredicted RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 HES7Q9BYE0 225 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ACPTQ9BZG2 426 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ZDHHC6Q9H6R6 413 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 MYOZ2Q9NPC6 264 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 DNAJC11Q9NVH1 559 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 TMEM161AQ9NX61 479 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 GIMAP2Q9UG22 337 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 APOBEC3BQ9UH17 382 aaKnown RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ARMCX3Q9UH62 379 aaPredicted RBP0.93□□□□□ -2.26
UBXN4-207ENST00000471246 CIDEBQ9UHD4 219 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ERVK-19Q9WJR5 959 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 ATG4BQ9Y4P1 393 aa0.93□□□□□ -2.26
UBXN4-207ENST00000471246 FAM149AA5PLN7 773 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PINLYPA6NC86 204 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 OOEPA6NGQ2 149 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 RSPH10B2B2RC85 870 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 B4DXG7 233 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 K7ERI5 159 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 PDXKO00764 312 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 WDR46O15213 610 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TTI1O43156 1089 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 TSPAN2O60636 221 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLU7O95391 586 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 SLC2A10O95528 541 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CPNE6O95741 557 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 HSPA4LO95757 839 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 EPOP01588 193 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 IGLV1-47P01700 117 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 HSPB1P04792 205 aaKnown RBP0.92□□□□□ -2.26
UBXN4-207ENST00000471246 FCER2P06734 321 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 CHRNGP07510 517 aa0.92□□□□□ -2.26
UBXN4-207ENST00000471246 WNT2P09544 360 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms