RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TMEM158Q8WZ71 300 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 RIT1Q92963 219 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 ANGPTL4Q9BY76 406 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 GSX2Q9BZM3 304 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 PHACTR1Q9C0D0 580 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 GPRC5BQ9NZH0 403 aa17.28■□□□□ 0.36
NCKIPSD-209ENST00000470006 SAP18O00422 153 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 SIAH2O43255 324 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 TTC4O95801 387 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 KRT15P19012 456 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 HIST1H1TP22492 207 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 TLX1P31314 330 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 CXCR5P32302 372 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 MC3RP41968 323 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 SLC6A12P48065 614 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 TMED10P49755 219 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 IGLV3-21P80748 117 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 PCDH1Q08174 1060 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 DMTNQ08495 405 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 SLAMF1Q13291 335 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 DOC2AQ14183 400 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 EBPQ15125 230 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 PLEKHM3Q6ZWE6 761 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 CNTN4Q8IWV2 1026 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 OR1J4Q8NGS1 313 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 TANKQ92844 425 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 WNT2BQ93097 391 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 UCN3Q969E3 161 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 MAGOHBQ96A72 148 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 RHBDF1Q96CC6 855 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 PTCD3Q96EY7 689 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 CERS2Q96G23 380 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 ZC3HAV1LQ96H79 300 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 RBSNQ9H1K0 784 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 SNX15Q9NRS6 342 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 RYDENQ9NUL5 291 aaKnown RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 DNAJC11Q9NVH1 559 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 WWOXQ9NZC7 414 aa17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 CORO1CQ9ULV4 474 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-209ENST00000470006 OR6C76A6NM76 312 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 PCNAP12004 261 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ZNF37AP17032 561 aaPredicted RBP17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 CASP3P42574 277 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 NR1H2P55055 460 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 NRG3P56975 720 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 SLC37A1P57057 533 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 EEF1A1P68104 462 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ZNF460Q14592 562 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 TSNQ15631 228 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 FBXO48Q5FWF7 155 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 PAGE2BQ5JRK9 111 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 TEDDM1Q5T9Z0 273 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 EEF1A1P5Q5VTE0 462 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 FNDC7Q5VTL7 733 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 TTC27Q6P3X3 843 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 SCIMPQ6UWF3 145 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ENPP6Q6UWR7 440 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ANGPTL8Q6UXH0 198 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ADAMTSL2Q86TH1 951 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 GRAMD2AQ8IUY3 354 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 TMEM139Q8IV31 216 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 ST13P4Q8IZP2 240 aaPredicted RBP17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 NAT8LQ8N9F0 302 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 MAPK1IP1LQ8NDC0 245 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 TMEM171Q8WVE6 324 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 VPS39Q96JC1 886 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 EFCAB11Q9BUY7 163 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 EHD1Q9H4M9 534 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 METTL7AQ9H8H3 244 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 MS4A12Q9NXJ0 267 aa17.26■□□□□ 0.35
NCKIPSD-209ENST00000470006 USF3Q68DE3 2245 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 BANF1O75531 89 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 TGFB1P01137 390 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 TP53P04637 393 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 CPN1P15169 458 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 CRYGSP22914 178 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 LAPTM5Q13571 262 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 TMEM35AQ53FP2 167 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 C18orf63Q68DL7 685 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 TIGD3Q6B0B8 471 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 P4HA3Q7Z4N8 544 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 GALNT7Q86SF2 657 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 PPIL6Q8IXY8 311 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 PRR22Q8IZ63 422 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 CNEP1R1Q8N9A8 125 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 OR14L1PQ8NHC6 308 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 RDH11Q8TC12 318 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 ANKRD7Q92527 254 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 TMEM41AQ96HV5 264 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 PELOQ9BRX2 385 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 SORBS1Q9BX66 1292 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 MS4A8Q9BY19 250 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 CNOT10Q9H9A5 744 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 ROS1P08922 2347 aa17.25■□□□□ 0.35
NCKIPSD-209ENST00000470006 MSTNO14793 375 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 PRKRAO75569 313 aaKnown RBP17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 PTPN6P29350 595 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 KCNJ5P48544 419 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 RAP1GDS1P52306 607 aa17.24■□□□□ 0.35
NCKIPSD-209ENST00000470006 ATP5J2P56134 94 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms