RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LRRC74AQ0VAA2 488 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 GAB1Q13480 694 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 PCOLCEQ15113 449 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 ELAVL1Q15717 326 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 MAPKAPK3Q16644 382 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 PRICKLE4Q2TBC4 344 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 REP15Q6BDI9 236 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 FAAH2Q6GMR7 532 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 SLC2A7Q6PXP3 512 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 KIRREL2Q6UWL6 708 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 CPEB2Q7Z5Q1 589 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 ANKRD46Q86W74 232 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 CCDC116Q8IYX3 515 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 ZNF248Q8NDW4 579 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 C7orf57Q8NEG2 295 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 NFAM1Q8NET5 270 aaPredicted RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 ZFP28Q8NHY6 868 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 RP9Q8TA86 221 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 PTPMT1Q8WUK0 201 aaPredicted RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 KIAA1143Q96AT1 154 aaPredicted RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 NACC2Q96BF6 587 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 PPWD1Q96BP3 646 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 C8orf44Q96CB5 159 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 DGAT2Q96PD7 388 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 INPP5KQ9BT40 448 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 PAIP1Q9H074 479 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 ZNF700Q9H0M5 742 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 CXorf36Q9H7Y0 433 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 SLC6A13Q9NSD5 602 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 NTMQ9P121 344 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 ZNF639Q9UID6 485 aa10.41□□□□□ -0.74
VCP-204ENST00000466100 PPIEQ9UNP9 301 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 MAP1BP46821 2468 aaKnown RBP10.41□□□□□ -0.74
VCP-204ENST00000466100 CPAMD8Q8IZJ3 1885 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PKD1L2Q7Z442 2459 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 A0A096LPI6 279 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 IGHV3-20A0A0C4DH32 117 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 LOC100653049A0A140TA62 436 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 SAGE2PA6NJ88 616 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CCT8L1PA6NM43 557 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 FXYD1O00168 92 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 HRKO00198 91 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PLOD2O00469 737 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 OR10H2O60403 315 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 KRT34O76011 436 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 UBOX5O94941 541 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 SLITRK5O94991 958 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PSMG1O95456 288 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CBX6O95503 412 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 DDAH2O95865 285 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CLPSP04118 112 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 IGKV3-11P04433 115 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 T-ENOLP0DO92 83 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 COX6A1P12074 109 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 MPIP34949 423 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 TRPC1P48995 793 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 GPR143P51810 404 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 MANFP55145 182 aaKnown RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 OR4D2P58180 307 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 EEF1A2Q05639 463 aaKnown RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 MAP4K2Q12851 820 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 HSPB3Q12988 150 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 DUSP8Q13202 625 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CYLC2Q14093 348 aaPredicted RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 SSPNQ14714 243 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 SFT2D3Q587I9 215 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 LRIF1Q5T3J3 769 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 FAM111BQ6SJ93 734 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 DLEU7Q6UYE1 221 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 TMEM64Q6YI46 380 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 MRGPREQ86SM8 312 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 GALNT12Q8IXK2 581 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 MSRB3Q8IXL7 192 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 AMER2Q8N7J2 671 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 ADCY4Q8NFM4 1077 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 OR7G2Q8NG99 324 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 OR11G2Q8NGC1 345 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 KCNE4Q8WWG9 221 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 METTL21AQ8WXB1 218 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 RCN3Q96D15 328 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CMTM5Q96DZ9 223 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 ITCHQ96J02 903 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 DPH1Q9BZG8 443 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 CCDC86Q9H6F5 360 aaKnown RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 NEUROD4Q9HD90 331 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PNO1Q9NRX1 252 aaKnown RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 TAS2R9Q9NYW1 312 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 SLAMF8Q9P0V8 285 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 C19orf25Q9UFG5 118 aaPredicted RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 TAGLN3Q9UI15 199 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 LEF1Q9UJU2 399 aaPredicted RBP10.4□□□□□ -0.74
VCP-204ENST00000466100 NDUFAF1Q9Y375 327 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 USP24Q9UPU5 2620 aa10.4□□□□□ -0.74
VCP-204ENST00000466100 PRRC2CQ9Y520 2896 aaKnown RBP10.4□□□□□ -0.75
VCP-204ENST00000466100 A0A087WV62 115 aa10.39□□□□□ -0.75
VCP-204ENST00000466100 IGHV1-45A0A0A0MS14 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms