RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 CXorf21Q9HAI6 301 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 VPS29Q9UBQ0 182 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 SH3BGRL2Q9UJC5 107 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 SLC12A4Q9UP95 1085 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 ERVK-19Q9WJR5 959 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 PCDHA9Q9Y5H5 950 aa12.21□□□□□ -0.45
C9orf3-210ENST00000462125 GTF3C1Q12789 2109 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 A0A1W2PS29 197 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ARHGAP10A1A4S6 786 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 C1orf226A1L170 272 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SERTM1A2A2V5 107 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 E9PLN8 166 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 MANBAO00462 879 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PRRG2O14669 202 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ZNHIT1O43257 154 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 KRT6AP02538 564 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 KRT6BP04259 564 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ABOP16442 354 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PTGS2P35354 604 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 KRT6CP48668 564 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 XKP51811 444 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 MAPK12P53778 367 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PPIAP62937 165 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 TRA2BP62995 288 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 FOXO1Q12778 655 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 EBPQ15125 230 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SLC22A10Q63ZE4 541 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SLC48A1Q6P1K1 146 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PAOXQ6QHF9 649 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 RNF111Q6ZNA4 994 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SLC29A4Q7RTT9 530 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 TDRPQ86YL5 185 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 DND1Q8IYX4 353 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF615Q8N8J6 731 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF441Q8N8Z8 693 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SLC22A8Q8TCC7 542 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 DOK4Q8TEW6 326 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PAQR8Q8TEZ7 354 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PHF10Q8WUB8 498 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SREK1Q8WXA9 508 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 DMRTA2Q96SC8 542 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 VKORC1Q9BQB6 163 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 CNPPD1Q9BV87 410 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 TTTY12Q9BZ98 90 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 WWTR1Q9GZV5 400 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 PPCSQ9HAB8 311 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 IL1RL2Q9HB29 575 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 SACM1LQ9NTJ5 587 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 EMCNQ9ULC0 261 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
C9orf3-210ENST00000462125 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
C9orf3-210ENST00000462125 A0A0G2JMM0 328 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 A0A1B0GVC2 190 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 A0A1W2PPB8 328 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 A0A1W2PRS3 328 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 KIR3DP1A8MWS1 328 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 G3V2L1 256 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 ULK1O75385 1050 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 IGHG3P01860 377 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 SHBGP04278 402 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 P04436 131 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 FBXO45P0C2W1 286 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 CCL3P10147 92 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 PORP16435 677 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 S1PR1P21453 382 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 SMSP52788 366 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 PKNOX1P55347 436 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 MAP4K2Q12851 820 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 CSTF3Q12996 717 aaKnown RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 LCP2Q13094 533 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF630Q2M218 657 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 GK5Q6ZS86 529 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 GPRIN3Q6ZVF9 776 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 SLC22A16Q86VW1 577 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 GBP7Q8N8V2 638 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 OR7G1Q8NGA0 311 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 METTL6Q8TCB7 284 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 SPACA9Q96E40 222 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 CCDC126Q96EE4 140 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 C11orf24Q96F05 449 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-210ENST00000462125 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 DEFB127Q9H1M4 99 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 GSTO2Q9H4Y5 243 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 PROK2Q9HC23 129 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 TMBIM4Q9HC24 238 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 CNIH4Q9P003 139 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF639Q9UID6 485 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 PSME2Q9UL46 239 aa12.19□□□□□ -0.46
C9orf3-210ENST00000462125 C2orf92A0A1B0GVN3 265 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 PRSS44E7EML9 344 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ACOT7O00154 380 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms